Transcript Information: S_Transcript_56813.p2


Annotated TAIR IDAT2G39170.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16334726-16335421 | Reverse length=231
E-Value3.4E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.295540623829
Replicate 29.9040989619501
Replicate 39.8944605995959
Condition 2: 8 Hour
Replicate 115.565978333674
Replicate 219.269183499911
Replicate 317.27050426389
Condition 3: 24 Hour
Replicate 19.8860056672762
Replicate 211.331905788174
Replicate 38.65281815358


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56813.p2 GENE.S_Transcript_56813~~S_Transcript_56813.p2 ORF type:complete len:274 (+),score=53.50,NEP|PF10167.5|4.3e-27 S_Transcript_56813:119-940(+)
ATGTGTGAGCTCTCTACTGCTGATGGCTTTGTGGAGATTAATGAAATCTTAGGAGACATGATAAAGTACGTGGCAAACGAACCCTCAGTAGGGTTGTACTACATCCAGCAACATGCTCAGAATGCAGTGCCCAATGTCATCAGGCTCAAGAACAATATCAAGGAGAAGTCACATGAAGTGAGTTTGCAAACTGAAGATCTCGACGACTCGATTGCCATGACGAGGTCGATGAAAGAATGTGGGTTTCCCATCATTGATGAGATGATTAGAGATATAAAGTCATCTCTAAACATAATGTCGTCTAAACAACCAATCAGAGGAGTGATCCAACATCGGAATTCAAGCTATCAGATGGGTGGGTCCAGCTCATGGGGCCCAGTTACATGGGCTCGCAGTGCAGTTAGTGTCCATGATGACAGTGTGAAAGGAGGAAGTTACTTTTCCAATGTGTTCAAATCCGCCAAAGAAAAAGCCGGGAATCTAAAGTGTCCGCAACTTGATCCGAAGGACTTGAAAGAGACGTTGGGAGGAGATTCGTCGAGCTATGATGATCGACGACTATTAGCACCTGAAAGCAATAGTTTCACTCAGGCAGACGAAGCCGATGAACTGCCAGTATCTAGCCAGGTCGAAGACGAGATGGCAGATGACAGTAATTTAAACACAGATGGGAAAGTACAACCTGTGTTATTGGCCTCGAATGACTTTGATGAGTTCAAGGCTGATAAAGAAGCAAGACTAGAGGAGTGGTTAAAAGGCTCTGGCAGCATTCCTGAGAAAGAAACTGAGGATACAGGAGTTGATCAGCTTGACAGTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56813.p2 GENE.S_Transcript_56813~~S_Transcript_56813.p2 ORF type:complete len:274 (+),score=53.50,NEP|PF10167.5|4.3e-27 S_Transcript_56813:119-940(+)
MCELSTADGFVEINEILGDMIKYVANEPSVGLYYIQQHAQNAVPNVIRLKNNIKEKSHEVSLQTEDLDDSIAMTRSMKECGFPIIDEMIRDIKSSLNIMSSKQPIRGVIQHRNSSYQMGGSSSWGPVTWARSAVSVHDDSVKGGSYFSNVFKSAKEKAGNLKCPQLDPKDLKETLGGDSSSYDDRRLLAPESNSFTQADEADELPVSSQVEDEMADDSNLNTDGKVQPVLLASNDFDEFKADKEARLEEWLKGSGSIPEKETEDTGVDQLDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST