Transcript Information: S_Transcript_56819.p2


Annotated TAIR IDAT2G39170.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16334726-16335421 | Reverse length=231
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.433506166065
Replicate 29.0256866371651
Replicate 37.3351791241593
Condition 2: 8 Hour
Replicate 112.843700986455
Replicate 213.092615965295
Replicate 312.595728130216
Condition 3: 24 Hour
Replicate 19.1847805585453
Replicate 29.915417564652
Replicate 312.754329273042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56819.p2 GENE.S_Transcript_56819~~S_Transcript_56819.p2 ORF type:complete len:176 (+),score=35.69 S_Transcript_56819:629-1156(+)
ATGTCGACTAAACAACCTATCAGAGGAGTGATCCAACATCGGAATTCAAGCTATCAGATGGGTGGGTCCAGCTCATGGGGCCCAGTTACCTGGACTCGCAGTGCAGTTAGTATCCATGATGACAGTGTGAGAGGAGGAAGTTACTTTTCCAATGTGTTCAAATCCGCCAAAGAAAAAGCCGGGAGTCTAAAGTGGCCGCAACTTGATCCAAAGGACATGAAAGATACGCTGGGAGGAGATTTGTTGAGCTGTGATGATCGACGACTAGTAGCGCCTGCAAGCAATAGTTCCACTCAGGCAGATGAAGCCGATGAACTGCCAGTATCTAGCCAGGTCGAAGACGAGATGGCAGATGACAGTAATTTAAACACAGATGGGAAAGTACAACCTGTGTTATTGGCCTCGAATGACTTTGATGAGTTCAAGGCTGATAAAGAAGCAAGACTAGAGGAGTGGTTAAAAGGCTCTGGCAGCATTCCTGAGAAAGAAACTGAGGATACAGGAGTTGATCAGCTTGACAGTTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56819.p2 GENE.S_Transcript_56819~~S_Transcript_56819.p2 ORF type:complete len:176 (+),score=35.69 S_Transcript_56819:629-1156(+)
MSTKQPIRGVIQHRNSSYQMGGSSSWGPVTWTRSAVSIHDDSVRGGSYFSNVFKSAKEKAGSLKWPQLDPKDMKDTLGGDLLSCDDRRLVAPASNSSTQADEADELPVSSQVEDEMADDSNLNTDGKVQPVLLASNDFDEFKADKEARLEEWLKGSGSIPEKETEDTGVDQLDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST