Transcript Information: S_Transcript_56857.p1


Annotated TAIR IDAT3G60820.1
Annotated Gene NameN-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
Annotated Gene Symbol(s)PBF1
Annotation TypeOrtholog
Chromosome Positionchr3:22472038-22473809 | Reverse length=223
E-Value3.3E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1104.55107628107
Replicate 299.085563816339
Replicate 393.77801963938
Condition 2: 8 Hour
Replicate 1123.47781804161
Replicate 2113.95660400861
Replicate 3121.61452338914
Condition 3: 24 Hour
Replicate 189.525013590917
Replicate 293.28586729193
Replicate 3104.60392523372


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56857.p1 GENE.S_Transcript_56857~~S_Transcript_56857.p1 ORF type:complete len:224 (+),score=36.59,Proteasome|PF00227.22|9.8e-33 S_Transcript_56857:187-858(+)
ATGACTAAGCAACAAGCCAATTGGTCTCCGTACGACTTCAATGGCGGGACTTGCGTGGCGGTGGCTGGTGCGGATTACTGTGTGATCGCTGCTGACACTCGAATGTGCACTGCCTATAACATTCTCACTCGCGATTACTCCAAAATTTGCAAACTTGCGGAAAAAAGCGTGTTGGCTTCATCAGGATTTCAGGCTGATGTGAGGGCTTTACAAAAGCATCTAGAAGCAAGGCACCTGATCTATCAACATCAGCACAACAAGCAGATGAGTTGCCCTGCAATGGCTCAACTCCTTTCAAACACTTTGTACTATAAGCGTTTCTTCCCATACTATGCGTTCAATGTTTTGGGCGGCCTTGATAATGAAGGCAAGGGTTGTGTCTTCACATATGATGCTGTTGGTTCATACGAGAAGGTTGGATACAGTTCCCAGGGTTCTGGTGCAAAGCTGATCATGCCTTTCCTTGACAACCAGCTGAAGTCCCCTAGTCCTTTATTATTACCTGTAAAGGATGCTGTGACCCCTCTGTCTGAATTAGAAGCGTTAGATTTGGTGAAAACGGCCTTTGCATCTGCAACTGAGAGAGACATTTACACTGGAGACAAGCTAGAAATAGTTGTTCTAAACAAGGAGGGTGTCCGCCGAGAATACATGGACCTCAGGAAAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56857.p1 GENE.S_Transcript_56857~~S_Transcript_56857.p1 ORF type:complete len:224 (+),score=36.59,Proteasome|PF00227.22|9.8e-33 S_Transcript_56857:187-858(+)
MTKQQANWSPYDFNGGTCVAVAGADYCVIAADTRMCTAYNILTRDYSKICKLAEKSVLASSGFQADVRALQKHLEARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAVGSYEKVGYSSQGSGAKLIMPFLDNQLKSPSPLLLPVKDAVTPLSELEALDLVKTAFASATERDIYTGDKLEIVVLNKEGVRREYMDLRKD*

Click here to download the sequence:
Link to NCBI Protein BLAST