Transcript Information: S_Transcript_56861.p1


Annotated TAIR IDAT3G46880.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G59080.1); Has 51 Blast hits to 51 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17265293-17266266 | Forward length=153
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 144.355002058634
Replicate 260.410019026529
Replicate 365.866914584288
Condition 2: 8 Hour
Replicate 179.970213689249
Replicate 286.291416181803
Replicate 343.392975481569
Condition 3: 24 Hour
Replicate 145.510173938738
Replicate 239.122055697266
Replicate 324.621519538328


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56861.p1 GENE.S_Transcript_56861~~S_Transcript_56861.p1 ORF type:complete len:84 (+),score=15.56 S_Transcript_56861:195-446(+)
ATGGAGAATAAGAAGGGACAAGTGGGTTCGGCTTCTTCACTTACTTCTCAGCTTTTTGGTCCTAAAGAATCATCATCATCCAATGATGTCTTTGCCTCCATTTTCCCACCTTCAAAGGGACAAGGACGAAATCAGGGCTGCTCTGAAGTGAGAGGATCATGGCAAAAGGACCCTGTTTCTACTGCCAATCAACCTTGGAATACCAGACCAGGTATGCTTTTTCATTTTAATTTTTTTTTTTTGGCCCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56861.p1 GENE.S_Transcript_56861~~S_Transcript_56861.p1 ORF type:complete len:84 (+),score=15.56 S_Transcript_56861:195-446(+)
MENKKGQVGSASSLTSQLFGPKESSSSNDVFASIFPPSKGQGRNQGCSEVRGSWQKDPVSTANQPWNTRPGMLFHFNFFFLAL*

Click here to download the sequence:
Link to NCBI Protein BLAST