Transcript Information: S_Transcript_56871.p1


Annotated TAIR IDAT1G45688.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17191502-17192870 | Forward length=342
E-Value1.1E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.118161648023
Replicate 219.042288606188
Replicate 313.8320520627
Condition 2: 8 Hour
Replicate 113.772647913148
Replicate 211.984918914139
Replicate 314.591205205791
Condition 3: 24 Hour
Replicate 18.8419766509548
Replicate 212.343683090689
Replicate 310.809447602193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56871.p1 GENE.S_Transcript_56871~~S_Transcript_56871.p1 ORF type:complete len:336 (+),score=26.61,LEA_2|PF03168.9|3e-06 S_Transcript_56871:217-1224(+)
ATGCACGCAAAAACCGATTCAGAGGTGACAAGCCTAGCAGCCTCATCACCAACAAGATCACCACCACGCCGCCCAGTCTACTACGTTCAGAGCCCCTCACGTGACTCCCACGATGGCGAGAAGACTGCGACGTCGTTTCACTCTACTCCTGTTCTTAGCCCAATGGGCTCTCCTCCTCACTCTCACTCCTCTGTGGGCCGCCACTCTCGCGAGTCCTCCTCCACGCGCTTCTCCGGCTCACTTAAACCCTCCGGTGGTGCCCGCAAGATCTCCCCTAACGACGCCGGATGTGGCGGCGGTAAGGCCGGTGCTCCTGGTGGTAAGAAGCAGCAGCACCGGCAACAACGCCCTCCTTGGAAAGATTGTGACGTCATTGAAGAAGAAGGTCTTCTTGATGATGAAGAAAGCCACAAACCTCTCCCTCGCCGCTGCTATTTTCTCGCTTTCATTCTCGGGTTCTTCCTTCTTTTCTCCTTCTTCTCTTTGATTCTTTGGGGCGCTGCTCGCCCCCAGAAGCCCAAGATCACCCTCAAGAGCATAAAGTTCGAGAGATTTATAGTATCACAAGGGTCGGACAACACGGGGGTGGCGACGGAGATGGCAACAGTGAACTCAACCGTGAAATTCCTGTACCGTAACACGGCGACGTTTTTCGGTGTCCACGTCACTGCTACTCCACTCGCACTCTCCTATTCCCAGATCACTTTGGCCACCGGAGATCTGAAGAAGTTCTATCAGTCAAGGAAGAGTCAGAGAACAGTGCATGTGCAAATACTGGGTGATAAAGTGCCGCTGTACGGAAGCGGGCAGAGTTTGGTGGGAACATCGACCGGCACACCGACGGCGCCGGTGAACATGACTTTGAGCTTCACGGTTCGCTCCAGAGCTTATGTGTTGGGAAGATTGGTGAAGCCCAAATTCTATAAAACTATCAATTGTGCTGTCGTTTTGGATCCTCTGAAAATCAGCACTGCCATCTCGCTGAAGAAAGCGTGTACTTACCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56871.p1 GENE.S_Transcript_56871~~S_Transcript_56871.p1 ORF type:complete len:336 (+),score=26.61,LEA_2|PF03168.9|3e-06 S_Transcript_56871:217-1224(+)
MHAKTDSEVTSLAASSPTRSPPRRPVYYVQSPSRDSHDGEKTATSFHSTPVLSPMGSPPHSHSSVGRHSRESSSTRFSGSLKPSGGARKISPNDAGCGGGKAGAPGGKKQQHRQQRPPWKDCDVIEEEGLLDDEESHKPLPRRCYFLAFILGFFLLFSFFSLILWGAARPQKPKITLKSIKFERFIVSQGSDNTGVATEMATVNSTVKFLYRNTATFFGVHVTATPLALSYSQITLATGDLKKFYQSRKSQRTVHVQILGDKVPLYGSGQSLVGTSTGTPTAPVNMTLSFTVRSRAYVLGRLVKPKFYKTINCAVVLDPLKISTAISLKKACTYQ*

Click here to download the sequence:
Link to NCBI Protein BLAST