Transcript Information: S_Transcript_56887.p1


Annotated TAIR IDAT5G53045.1
Annotated Gene Nameunknown protein; Has 122 Blast hits to 122 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi - 30; Plants - 41; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21508603-21509538 | Reverse length=96
E-Value4.2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.571515379731
Replicate 226.895591079637
Replicate 329.332732628203
Condition 2: 8 Hour
Replicate 134.729921373617
Replicate 232.172848996178
Replicate 327.609097850262
Condition 3: 24 Hour
Replicate 124.133395094371
Replicate 225.03811564625
Replicate 323.780784724824


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56887.p1 GENE.S_Transcript_56887~~S_Transcript_56887.p1 ORF type:complete len:105 (+),score=29.56,Pcc1|PF09341.6|7.1e-19 S_Transcript_56887:95-409(+)
ATGGAAGCTCAAACCCTTCCCACTCCCTCTTGGGAATTCATCTGTGACTTGGAAGTAGATTTTCAGTCAGAAGAGAAGGCCTTGATAGTGTATTCTTCACTGAATGTTGACAAAGAGTTGCAACCAGATAAAGTAAAAAGGCTTATGTCAGTCTCTGATGGGAAGCTTGCAGTGCATTTTGAAGCAGTAGAACCTAGATTTCTACGTGCATCATTCAGTGCATTTGTGGATGTTTTGACACTAGCTACAAGAACCATTGAAGAATTTGGCCAAGACGGCCAAATTGAAACTGTTCTTCATTCTGAAGCACGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56887.p1 GENE.S_Transcript_56887~~S_Transcript_56887.p1 ORF type:complete len:105 (+),score=29.56,Pcc1|PF09341.6|7.1e-19 S_Transcript_56887:95-409(+)
MEAQTLPTPSWEFICDLEVDFQSEEKALIVYSSLNVDKELQPDKVKRLMSVSDGKLAVHFEAVEPRFLRASFSAFVDVLTLATRTIEEFGQDGQIETVLHSEAR*

Click here to download the sequence:
Link to NCBI Protein BLAST