Transcript Information: S_Transcript_56921.p1


Annotated TAIR IDAT5G40520.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; Has 3696 Blast hits to 2485 proteins in 391 species: Archae - 10; Bacteria - 571; Metazoa - 1013; Fungi - 530; Plants - 217; Viruses - 74; Other Eukaryotes - 1281 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16231515-16234276 | Reverse length=693
E-Value1.9E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3928239653578
Replicate 211.147865010207
Replicate 310.848668284471
Condition 2: 8 Hour
Replicate 19.1991879799397
Replicate 210.831619024664
Replicate 39.709481111168
Condition 3: 24 Hour
Replicate 112.355703331784
Replicate 211.759202386521
Replicate 311.222478279803


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56921.p1 GENE.S_Transcript_56921~~S_Transcript_56921.p1 ORF type:complete len:663 (+),score=136.13 S_Transcript_56921:415-2403(+)
ATGCAGCCTCTGGACACAGATGCACATGCTATTGAACAATCTTTGCGGGAACATGAAAAAGATCTTTGGTGTAAGAGAAAGTTTTTGATGGGATTGTATGCTGTACCAGGCAATGATCATCACATGAGGTCATATGCCAGAAATCAGTCATTTCTGCCTGAGTCATTCTTGAGGAAAGATGATGTCTTCTATGAAGATGTTAAACAGCTTGTTGAGAAAGGCTTTGGAGCAGTTAATACTCACATATGGCAGGAGATAACTCCTGATGATGTAGAATTCCGTGATCTACACAGTATGTTGAAAACTATTTTGAGCTCACTAGATGACTTTTCAAACAGTGGGCTATACCATTTAGCCAAGATAGTTACCAGAGATTCAGTTGCATTCTGTAAAACCCGTTCACAGATGAAGAAAGTTATCAAAAAAGGTCTCTCAGATATACAGAACAGCAATTTGCCTAACGATCACGCCAGAACTCAGAGTGAAATATCCCAACTGCTGAAGAACCAAAGGATTTTCCGGCAGAATCATGTGCAGCACTTAAATATGACTCTGAAATCTCATAGTGATGTTGTTATGAAGGTTGTGAATGGACTCGAGGCCATGCGTACTCGGACCCTGTTGGCAATGCACCGTAAACTCAATGGCACCCATGGATACAAGCCCCAGTTATACCCTCAAAGAACTGGATGGAAAAGGGATCGTTTGATTGATAGGGTTAGGGCATTGTGTCTGGGCATGATCAACCAACTTGGCCCAGCAGATAAGCTACCAGAACCTTTGGCCAAAGCAATGGCAGTGGCAGGTTTATCATCCAGGATATATGCTTTCCAGCATGATCTTTCTCAGGCTACATTTGTTCATCTAACTCCAGAAGTAGAGACATTACAGAATCAATTACTAAAGGCTATTCATTCATTTAAGGCGTTATTTCAAAAAAAACACAAATTAAAGACAGTGGTACACCTCTTGGACCCTGGACATAAAGGGGAGAGAAGGATCATAGCAAGAGCAGTCAAGAATATGTTGGTAGACTTTCTTTTCGAGTGCAGTGATATGGAGGCAATTCCAGATTCATTATTAGACGCTCTATCTTATATCAATAAGACGAGACCCAGTATGCACAGACTTCTCACCAAAGATTTCCTTGAAGAAGAGTTAGAATGTATATTGAATGTAAGTGCTCATATAAGGCAAGTTTTGTGGGATCATGTTTCTGTTGATGATATTGATCAAGATTTTGCGAGTGCATACATGGAGGAACTGGAAGAAAGTGACAATGGAGATATTTTTGATGAGGATGATGACAGGCCACAGCTGCACATAGATGCCTTGCGTGAGGTTCAGGTCAAGTTCAATGTCTTCAATGAAGAAGTACAAAGTACTGGAGATCCAGAGCAGGCCAGTTTTGGTTCGTCACTAGGTCATTTGGATGATACCAATGAATCTTCCAGTCCATCTTTTGGGGCCACAGGATATGTCGATGATGTTTTATGTACAAATACAGATATTAGTGGAGGTGACCTGCTGATGTCAACATCTTCTGGAAGTGATGCTTCCCCTCATGGTTCTCCTATATCACAGAAATCTGGTGATAGTGTGGGCAGACAAGATCCTGAAAAAAATGCCTCAGTTGATTCAGTCAATCTTACATGCTCAAAAGAAAATCCAATGCCTGAAGATCAGGACAAAGTCAAAAACCGATATGCTGTCGTCCAACAAGTATGTGATCAAGTAAGTGTGGTTGCTTACCAGCTTATTGGACATGTTTTGAAGGATTTTGGACGGAGGGAAGCATTAGAATTAGAGGTGGATGATGAACTATACCTTTTTGGTGAATATTCAGGGCTGGAACAATTCCAAGGCCTGTTAGCAAACTCAATAGACAAAGATGCGGATGGTGCAATCATTGTGCGAGCAGTTCATAAAGTTGTACCCTCATTGTCTAACAGTGAACTGGAGATGGTGAAGAAGATCATGAGCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56921.p1 GENE.S_Transcript_56921~~S_Transcript_56921.p1 ORF type:complete len:663 (+),score=136.13 S_Transcript_56921:415-2403(+)
MQPLDTDAHAIEQSLREHEKDLWCKRKFLMGLYAVPGNDHHMRSYARNQSFLPESFLRKDDVFYEDVKQLVEKGFGAVNTHIWQEITPDDVEFRDLHSMLKTILSSLDDFSNSGLYHLAKIVTRDSVAFCKTRSQMKKVIKKGLSDIQNSNLPNDHARTQSEISQLLKNQRIFRQNHVQHLNMTLKSHSDVVMKVVNGLEAMRTRTLLAMHRKLNGTHGYKPQLYPQRTGWKRDRLIDRVRALCLGMINQLGPADKLPEPLAKAMAVAGLSSRIYAFQHDLSQATFVHLTPEVETLQNQLLKAIHSFKALFQKKHKLKTVVHLLDPGHKGERRIIARAVKNMLVDFLFECSDMEAIPDSLLDALSYINKTRPSMHRLLTKDFLEEELECILNVSAHIRQVLWDHVSVDDIDQDFASAYMEELEESDNGDIFDEDDDRPQLHIDALREVQVKFNVFNEEVQSTGDPEQASFGSSLGHLDDTNESSSPSFGATGYVDDVLCTNTDISGGDLLMSTSSGSDASPHGSPISQKSGDSVGRQDPEKNASVDSVNLTCSKENPMPEDQDKVKNRYAVVQQVCDQVSVVAYQLIGHVLKDFGRREALELEVDDELYLFGEYSGLEQFQGLLANSIDKDADGAIIVRAVHKVVPSLSNSELEMVKKIMSL*

Click here to download the sequence:
Link to NCBI Protein BLAST