Transcript Information: S_Transcript_56959.p1


Annotated TAIR IDAT4G27390.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13703417-13704655 | Reverse length=235
E-Value3.9E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 147.523216491394
Replicate 259.009206991131
Replicate 363.012681618969
Condition 2: 8 Hour
Replicate 1196.41361478597
Replicate 2176.13391944928
Replicate 3168.49670011557
Condition 3: 24 Hour
Replicate 168.221917885308
Replicate 250.813704526334
Replicate 343.738227797761


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56959.p1 GENE.S_Transcript_56959~~S_Transcript_56959.p1 ORF type:complete len:252 (+),score=44.14 S_Transcript_56959:120-875(+)
ATGACAATACTTAGCCCTCTATCCATCTACACCTCAACTTATCCTTTCCATAGAAGCCCACTTCACAGAGCAAGATGCTATCTTCTTTCAAAATCACAACTGCCCATCAACCTTTTCTATCTAAGATGCACAAAAGCTGACACCTTTACTCAAAATTTGTCAAAAAAGGAGATGTGGAGTTATAAAGATAATCGGTGTTTGCTTGGATTGAGAAGTAAATATTGGATTTTTGGGAGAGAAAAGAGGGTTGTTATGGTGAGGTTTAATCACGGTTTTGGGTTTAATGGTGGTGATGGGGGTGAAAGTGGTAGAAAAATTGATGGGAATACTGCAAGGATTTTGGGTAATCTTGCTTTGGCTGTGGGATTGACTTATCTTTCTATGACTGGCCAGCTTGGTTGGGTTTTGGATACTATTGTGTCCCTTTGGCTGCTTGCAATAATTTTACCAGTAGTTGGTATAGGAGCATTCCTCTGGTGGGCAGGACGAGACATGATGCAAGGCACTTGCCCAAACTGCGGCAATGCTTTTCAGGTTTTCAGATCTTCTCTCAACGATGAGCTTCAACTGTGCCCTTTTTGCAGCCAGCCCTTCTCAGTGGATGGGAATGAGTTTGTGAAGGAACCTATTAAGTTCTCCAAAGGTTCTACCTCATTTGGACAAGCCTTCGACAATTTCTCTCCGTGGTCAACAAAAGGAAAGGACACTTCAACAGCTGTAGTGGATGTTGAAGCTGAAATAAAAGATGTAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56959.p1 GENE.S_Transcript_56959~~S_Transcript_56959.p1 ORF type:complete len:252 (+),score=44.14 S_Transcript_56959:120-875(+)
MTILSPLSIYTSTYPFHRSPLHRARCYLLSKSQLPINLFYLRCTKADTFTQNLSKKEMWSYKDNRCLLGLRSKYWIFGREKRVVMVRFNHGFGFNGGDGGESGRKIDGNTARILGNLALAVGLTYLSMTGQLGWVLDTIVSLWLLAIILPVVGIGAFLWWAGRDMMQGTCPNCGNAFQVFRSSLNDELQLCPFCSQPFSVDGNEFVKEPIKFSKGSTSFGQAFDNFSPWSTKGKDTSTAVVDVEAEIKDVD*

Click here to download the sequence:
Link to NCBI Protein BLAST