Transcript Information: S_Transcript_56988.p1


Annotated TAIR IDAT5G01410.1
Annotated Gene NameAldolase-type TIM barrel family protein
Annotated Gene Symbol(s)PDX1, ATPDX1.3, RSR4, PDX1.3, ATPDX1
Annotation TypeOrtholog
Chromosome Positionchr5:172576-173505 | Reverse length=309
E-Value1.7E-207
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1500.63051524838
Replicate 2435.12332248734
Replicate 3336.03490059033
Condition 2: 8 Hour
Replicate 1126.99849057871
Replicate 2125.72550082198
Replicate 3123.19606491186
Condition 3: 24 Hour
Replicate 1305.89816082835
Replicate 2381.08511286363
Replicate 3340.45730866331


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_56988.p1 GENE.S_Transcript_56988~~S_Transcript_56988.p1 ORF type:complete len:313 (+),score=32.57,SOR_SNZ|PF01680.13|6.4e-112,ThiG|PF05690.10|1,ThiG|PF05690.10|1.1e+03,ThiG|PF05690.10|1.2e-07,Dus|PF01207.13|1.5e+03,Dus|PF01207.13|0.49,Dus|PF01207.13|0.033 S_Transcript_56988:314-1252(+)
ATGTCGGGCAGTGGAGTGGTGACCGTGTACGGCAACGGTGCCATCACCGAGACCTCTACCAACAAAAAATCCCCCTTCTCCGTCAAAGTGGGCCTGGCCCAAATGCTCCGTGGTGGCGTCATCATGGACGTCGTTACCCCCGAACAAGCCCGCATCGCCGAAGAAGCCGGTGCATGTGCCGTCATGGCTCTGGAGCGCGTCCCCGCCGACATCCGCGCTCAAGGGGGTGTCGCTCGTATGTCGGACCCTCAACTCATCAAAGACATCAAACGGGCCGTGACCATCCCGGTCATGGCCAAGGCCCGCATTGGCCATTTCGTGGAGGCCCAAATCCTCGAAGCCATCGGAATCGACTACGTGGACGAATCTGAAGTCCTAACCCTTGCTGACGAGGACAACCACATCAACAAGCACAATTTCCAGATCCCTTTTGTCTGTGGCTGTCGTAACCTCGGCGAAGCCCTTCGTCGTATTCGTGAAGGTGCTGCTATGATCCGTACCAAGGGTGAAGCTGGCACTGGCAACATCATCGAGGCTGTCCGTCACGTGAGGTCCGTGATGGGGGAGATTCGTGTTTTAAGAAACATGGATGATGACGAGGTTTTCGCTTACGCTAAGAAGCTGTCGGCCCCTTACGATTTGGTTATGCAGACTAAGCAGCTTGGGAGGCTCCCCGTTGTTCAGTTCGCTGCTGGTGGGGTCGCCACCCCTGCTGACGCCGCACTCATGATGCAATTGGGCTGTGACGGAGTTTTTGTCGGGTCTGGTGTGTTCAAGAGTGGGGACCCGGCTAGGCGGGCTCGCGCTATTGTTCAGGCTGTTACTCATTATAGTGACCCTGATTTGTTGGCTGAGGTTAGCTGTGGCTTGGGTGAGGCCATGGTTGGGATTAATTTGAATGATGAGAAGGTTGAGAGGTACGCCAGTCGCTCCGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_56988.p1 GENE.S_Transcript_56988~~S_Transcript_56988.p1 ORF type:complete len:313 (+),score=32.57,SOR_SNZ|PF01680.13|6.4e-112,ThiG|PF05690.10|1,ThiG|PF05690.10|1.1e+03,ThiG|PF05690.10|1.2e-07,Dus|PF01207.13|1.5e+03,Dus|PF01207.13|0.49,Dus|PF01207.13|0.033 S_Transcript_56988:314-1252(+)
MSGSGVVTVYGNGAITETSTNKKSPFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADEDNHINKHNFQIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVMGEIRVLRNMDDDEVFAYAKKLSAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDLLAEVSCGLGEAMVGINLNDEKVERYASRSE*

Click here to download the sequence:
Link to NCBI Protein BLAST