Transcript Information: S_Transcript_57004.p1


Annotated TAIR IDAT3G47510.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 15 Blast hits to 15 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17511173-17511615 | Forward length=85
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.235769705839
Replicate 213.388530415244
Replicate 315.763022293676
Condition 2: 8 Hour
Replicate 123.694878130148
Replicate 226.004883888913
Replicate 324.595208774978
Condition 3: 24 Hour
Replicate 115.683506095811
Replicate 212.009883057552
Replicate 321.126156852149


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57004.p1 GENE.S_Transcript_57004~~S_Transcript_57004.p1 ORF type:5prime_partial len:117 (+),score=19.32 S_Transcript_57004:3-353(+)
GGGGACTATGAACCAAACAAGCAGATAGTAAGCTTAGCATTGAAACCTCACATCACAAGAAACTTCTTGGGAAAAAAAATGGGTACAAAACCTCTCAAGCTTATTTTTCTTCTCTTCCTTTACTCATCCTCTTTAATAATATCCACATATGCAGTTCCTTCTTCAAGAAGCTTGATTAATCTAATTAAACAACAACCATCAGCCGACCCTCTATTGTCTCAGGGGAAGGTTGATGTGAGAATTGAAGAAGGAAGGAATAAAGAAGGAAGAATGGATATTGAACTTACAGATTATCCAGGCACTGGAGCTAATAGAAACCATGAACCTAGAGAACCTGGAAACAATGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57004.p1 GENE.S_Transcript_57004~~S_Transcript_57004.p1 ORF type:5prime_partial len:117 (+),score=19.32 S_Transcript_57004:3-353(+)
GDYEPNKQIVSLALKPHITRNFLGKKMGTKPLKLIFLLFLYSSSLIISTYAVPSSRSLINLIKQQPSADPLLSQGKVDVRIEEGRNKEGRMDIELTDYPGTGANRNHEPREPGNNG*

Click here to download the sequence:
Link to NCBI Protein BLAST