Transcript Information: S_Transcript_57017.p1


Annotated TAIR IDAT5G11430.1
Annotated Gene NameSPOC domain / Transcription elongation factor S-II protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3648469-3652256 | Forward length=873
E-Value3E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1373077450932
Replicate 21.6594234880866
Replicate 31.702406407717
Condition 2: 8 Hour
Replicate 11.3852390291471
Replicate 22.4092760073552
Replicate 32.1862407799981
Condition 3: 24 Hour
Replicate 11.6803756531226
Replicate 21.4334376552562
Replicate 31.3796673862628


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57017.p1 GENE.S_Transcript_57017~~S_Transcript_57017.p1 ORF type:complete len:585 (+),score=134.10 S_Transcript_57017:319-2073(+)
ATGCAGCCACCAAGGCCTTTTAGGGGAGCCCATTATGACAAAAACATGTTTACATTTCTTCCAGCAGCTTCTAATCGATATGTTTTGGCTGAGTCATCTAGGAAAAGAAAACTAATGGCTTCTGATCACCAAAGCACTATGCCTGCTCCAACTATCAGGCCTGGCTTTGTTGGAATGTCTGACCCTAATCTGAATACTAATGATATACTAGGTAAAGAACTTCAGAATTCTGTTCGAGCTCATCCACCTGGGGAGTCACTACATCCTAAAAATTATCCTCATGAAATTCGACAGTGGGAGCATAATAATTATTCAGCATCTTGGCATCCTAATAAGAGGGATCTTCATGAAACAACTTCTGAATATATTGGATATTCTTCTTTCAGTGGACGGCTGCAACCTCCCCATCACACAGATCCTTTCCCTTCATTTCACAGAACAGAAGGCCAAATTCATAACTTGTCAAGGTGGCCTCCATTGATGGCGGAAGACTTAAACCAGCAAGTGGAGCATGAAGCGAAGGCACATGTAGCAAGGAAAGAGCATAATCCTCATATTCAGGAATTTCAAAACGGTGTGCCAGACAAGCCTGCTGAGATAATGTTTGCAGCTTCTCTTTCTCATGAACTAGCATCTAAAGTTCGAGGGGAGTCTGAAAGGTTGCAGAAAATTTTTTTGAAGACAGGGACTTGTGTGGTGGGTTCTGATATGAAAGATTGTCCTAAAGCATCAACATGTCCTCCTCCTCTTACTGGAGACTTTAGCCAGCTCCAAAACCATCCATCAAGAGCACTTGTAGCAAAGGAAGACAACGTATCTCATTTTCAGGAATTTCAAAACTGTGGGATGCAAAAGTCTGCTCAGGTGAACGTTGTGGCATCTGATTCTTGTGAGGAAGCATCTGAAAATTTGGGGGAGTTACAAAACTTGCAGCAGAGTTTTCTTAAAACTGGGGCCTTTGTTGTGGGCGTTGAAAAAGTTTGTCATGAGGAAACATACGAATTTCAGCCTTGTTCTAATGTGAAAGAAAGAGGCGAGGCTTGTAGTTTTGCCAAAATTGACAGTTCTCATATGCCTGGGGATAATTGCATTCATTCTGTAAACAACTTGCCATATGAACCTGACCATCTCCTCCAAAATGTACTAAGACTTCTGAGTGCTGCTTCTGGTGTTGATTTATCTGGTAATTCTAATGGTAGAATTCACAATCATGAAGATGATAGTCAGAATGTAAAGCAATTAATGGAGACAATCTTATCCAAGACTGTTGCAGCTGGTCCTGGTCTTGATAAACCGAGTCATGTTGAATCTGGTCCGAGTCTTGATAAGACTGGTCATGCTGCTGCTGGTCCTATTCTTGATAAGCCTGATCTAAATGGTGAAAAGTGTTCTGTTAAATCAGACAAAGAATGCAAACCGGAAACTGATGCGTTGGCTCTTACTGAAAAGCTGTGGGAAGGGATCCTTCAATTAAGCTCCTCTGTTTCAGTACCAGCAATTGCACTTTTTAAAAGCGGAGAGAAGATGCAGGACTTCAACTGGTCTGAATCTGTGGAAGTTAAAGGGAAAGTAAGACTAGAAGCTTTTGAAAAATATGTGCAAGGTCTTCCCCGCTCACGCACTCGTGGGCTTATGGTAAGACAAGTTAACTACCACTGTAGATATGTCATTATCAGTCATTTGGTGCTACCTACTTTTTGTCATGTCAAGATAGGGAACTTATCAATATATACAACACAGTTGTGCAAATACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57017.p1 GENE.S_Transcript_57017~~S_Transcript_57017.p1 ORF type:complete len:585 (+),score=134.10 S_Transcript_57017:319-2073(+)
MQPPRPFRGAHYDKNMFTFLPAASNRYVLAESSRKRKLMASDHQSTMPAPTIRPGFVGMSDPNLNTNDILGKELQNSVRAHPPGESLHPKNYPHEIRQWEHNNYSASWHPNKRDLHETTSEYIGYSSFSGRLQPPHHTDPFPSFHRTEGQIHNLSRWPPLMAEDLNQQVEHEAKAHVARKEHNPHIQEFQNGVPDKPAEIMFAASLSHELASKVRGESERLQKIFLKTGTCVVGSDMKDCPKASTCPPPLTGDFSQLQNHPSRALVAKEDNVSHFQEFQNCGMQKSAQVNVVASDSCEEASENLGELQNLQQSFLKTGAFVVGVEKVCHEETYEFQPCSNVKERGEACSFAKIDSSHMPGDNCIHSVNNLPYEPDHLLQNVLRLLSAASGVDLSGNSNGRIHNHEDDSQNVKQLMETILSKTVAAGPGLDKPSHVESGPSLDKTGHAAAGPILDKPDLNGEKCSVKSDKECKPETDALALTEKLWEGILQLSSSVSVPAIALFKSGEKMQDFNWSESVEVKGKVRLEAFEKYVQGLPRSRTRGLMVRQVNYHCRYVIISHLVLPTFCHVKIGNLSIYTTQLCKY*

Click here to download the sequence:
Link to NCBI Protein BLAST