Transcript Information: S_Transcript_57018.p1


Annotated TAIR IDAT5G11430.1
Annotated Gene NameSPOC domain / Transcription elongation factor S-II protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3648469-3652256 | Forward length=873
E-Value2E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5036052122059
Replicate 23.1830895664584
Replicate 32.6774395937418
Condition 2: 8 Hour
Replicate 15.2111639097773
Replicate 23.9539065224404
Replicate 34.1132474188152
Condition 3: 24 Hour
Replicate 13.4471186752516
Replicate 23.0041301187764
Replicate 33.2749994538654


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57018.p1 GENE.S_Transcript_57018~~S_Transcript_57018.p1 ORF type:complete len:1109 (+),score=279.45,SPOC|PF07744.9|1.8e+03,SPOC|PF07744.9|1.4e-10 S_Transcript_57018:319-3645(+)
ATGCAGCCACCAAGGCCTTTTAGGGGAGCCCATTATGACAAAAACATGTTTACATTTCTTCCAGCAGCTTCTAATCGATATGTTTTGGCTGAGTCATCTAGGAAAAGAAAACTAATGGCTTCTGATCACCAAAGCACTATGCCTGCTCCAACTATCAGGCCTGGCTTTGTTGGAATGTCTGACCCTAATCTGAATACTAATGATATACTAGGTAAAGAACTTCAGAATTCTGTTCGAGCTCATCCACCTGGGGAGTCACTACATCCTAAAAATTATCCTCATGAAATTCGACAGTGGGAGCATAATAATTATTCAGCATCTTGGCATCCTAATAAGAGGGATCTTCATGAAACAACTTCTGAATATATTGGATATTCTTCTTTCAGTGGACGGCTGCAACCTCCCCATCACACAGATCCTTTCCCTTCATTTCACAGAACAGAAGGCCAAATTCATAACTTGTCAAGGTGGCCTCCATTGATGGCGGAAGACTTAAACCAGCAAGTGGAGCATGAAGCGAAGGCACATGTAGCAAGGAAAGAGCATAATCCTCATATTCAGGAATTTCAAAACGGTGTGCCAGACAAGCCTGCTGAGATAATGTTTGCAGCTTCTCTTTCTCATGAACTAGCATCTAAAGTTCGAGGGGAGTCTGAAAGGTTGCAGAAAATTTTTTTGAAGACAGGGACTTGTGTGGTGGGTTCTGATATGAAAGATTGTCCTAAAGCATCAACATGTCCTCCTCCTCTTACTGGAGACTTTAGCCAGCTCCAAAACCATCCATCAAGAGCACTTGTAGCAAAGGAAGACAACGTATCTCATTTTCAGGAATTTCAAAACTGTGGGATGCAAAAGTCTGCTCAGGTGAACGTTGTGGCATCTGATTCTTGTGAGGAAGCATCTGAAAATTTGGGGGAGTTACAAAACTTGCAGCAGAGTTTTCTTAAAACTGGGGCCTTTGTTGTGGGCGTTGAAAAAGTTTGTCATGAGGAAACATACGAATTTCAGCCTTGTTCTAATGTGAAAGAAAGAGGCGAGGCTTGTAGTTTTGCCAAAATTGACAGTTCTCATATGCCTGGGGATAATTGCATTCATTCTGTAAACAACTTGCCATATGAACCTGACCATCTCCTCCAAAATGTACTAAGACTTCTGAGTGCTGCTTCTGGTGTTGATTTATCTGGTAATTCTAATGGTAGAATTCACAATCATGAAGATGATAGTCAGAATGTAAAGCAATTAATGGAGACAATCTTATCCAAGACTGTTGCAGCTGGTCCTGGTCTTGATAAACCGAGTCATGTTGAATCTGGTCCGAGTCTTGATAAGACTGGTCATGCTGCTGCTGGTCCTATTCTTGATAAGCCTGATCTAAATGGTGAAAAGTGTTCTGTTAAATCAGACAAAGAATGCAAACCGGAAACTGATGCGTTGGCTCTTACTGAAAAGCTGTGGGAAGGGATCCTTCAATTAAGCTCCTCTGTTTCAGTACCAGCAATTGCACTTTTTAAAAGCGGAGAGAAGATGCAGGACTTCAACTGGTCTGAATCTGTGGAAGTTAAAGGGAAAGTAAGACTAGAAGCTTTTGAAAAATATGTGCAAGGTCTTCCCCGCTCACGCACTCGTGGGCTTATGGTGATGTCACTTTGCTGGAAGGAAGGCTCCACTGATGCTACTCGCAAAAGCCTGGAGGAGGTTGCACGTAAATATAAAGAAGGGAAGAGGGTTGGGTTTGCACAGCGTGGTCGTATTGATATGTACATTTGTCCTAACAGTGCGACAATAATTACTATTCTCGCGAAACATGGTTTCTTCAAGGGATTGACTGCGGTTAAAGTAAAAGGCGATCCACTTATCGGGTGTGTTGTATGGCGGAAAAACACATCTTCAGTTTCTGTCAAACAGACATCCGAGGTTAATACTACACCTTCAGGGCTGTCTGTGAGTTCCCCTTCAGTCTCTTCTTCCCTGCAGGTTGCTGATGAAATCTCAACCACAGGCAACAAGAATCAGGAACCCCTAACATCATCATCTGAAAAGGATCAGAAAGTGAATAATGGTAGAGATATAGGTGGAAGACAAAATAGTCCTGAATTTTGTGTCTCTCCTCATGATCAACCTAAACAACCAACAAACAATGAAAACAAGTTGGTCTTGATCTCCGGTACTACTACGCAGATATCAGCTTTGAAGACTGTTGTGGAACTCAATAAGCCTAATGTTCCAAATCAGGGTGCAGCAACTTCTGATGTTGATGATGATTTACCTGAATATGATTTTAGAACTGCAGTTTCTCATACTTTGACATGTAGGAGTTCTGAAGTCAAGACAATTGCTGATTCAAGAACTGAAGCTGAACAGTTTAAGGACAGTCATGTCCCAAGTCCCATGTCGGCCCGAAGGAGGTCAGAAAGTTCAAGTGTTTGTAGACTTTCATCAGATTCCCATTTCCAAGTACTTGTCCCTCAAAACATAGAGAATCAATCCAATTTTGACACCGCAACTTTGCCCATTGAGCAACAAAAGCAAATCACAGCTAGCTCAGCAATTCTAAAGCCACCAGATTTTGCCCCAAAACCTATGTCAGTACAAATGGGGGTTGAAAGTTCAACTATTTCCAGACCTCCACCAGATTCCCATTTTAAAGTGGTCCCTCAAAACATAGAGCTTCAGTCTAAATGTCATGTCCCAACTTCACCCAAAGAGCCACCAAAGCAAATCACAGCAAGTCCAAAACCAGCAGGTTTTCATTTTGAAGGACCATTTCAAGTACACAGAGGGCATCTGCCTGAAATACAATTACCAAGTTTGCCAGAAAAGAAGCAAACTGGGAACTGTACAGCTGGTCCAAAGCCAAGAAACCTCTTTGATGATGAGGATGATGACATACCAGAATGGTGCCCACCAGATTTCACAAGGCCAAATCAAGAGGTAGCTCAACAGGCTAGAGCACCATTTGCTTTAAACCACTCTAAAGTTCCCATGCCAAGCCATCCTGTATCAGCTCCTGGCCATGCACCATCTGCTTCAAGCCACTCCAATATGCTTATGTCAGGCTCTGTTGATTCAGCATGTGGCCATCTTCCATCCCTGCCCCCAAGCCATCCTGCATCAATTTCGAGGAAGCTCCAGTTCCGAGACAAAGACCAACCCTCTGTGCCTCGTTTTCAGAAGCTGTTAGATGATAAACCAGCTTCCAACAGTTCCATTGACAATGATCCAGATGCTCCCCCAGGTTTTGCTCCCAATCCTGCTGCAGTGCCTTGTGACCCTCGTCGCATGAAGGAAACCATTCATCTCCCTCATTCGAGGGGTATGAGGCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57018.p1 GENE.S_Transcript_57018~~S_Transcript_57018.p1 ORF type:complete len:1109 (+),score=279.45,SPOC|PF07744.9|1.8e+03,SPOC|PF07744.9|1.4e-10 S_Transcript_57018:319-3645(+)
MQPPRPFRGAHYDKNMFTFLPAASNRYVLAESSRKRKLMASDHQSTMPAPTIRPGFVGMSDPNLNTNDILGKELQNSVRAHPPGESLHPKNYPHEIRQWEHNNYSASWHPNKRDLHETTSEYIGYSSFSGRLQPPHHTDPFPSFHRTEGQIHNLSRWPPLMAEDLNQQVEHEAKAHVARKEHNPHIQEFQNGVPDKPAEIMFAASLSHELASKVRGESERLQKIFLKTGTCVVGSDMKDCPKASTCPPPLTGDFSQLQNHPSRALVAKEDNVSHFQEFQNCGMQKSAQVNVVASDSCEEASENLGELQNLQQSFLKTGAFVVGVEKVCHEETYEFQPCSNVKERGEACSFAKIDSSHMPGDNCIHSVNNLPYEPDHLLQNVLRLLSAASGVDLSGNSNGRIHNHEDDSQNVKQLMETILSKTVAAGPGLDKPSHVESGPSLDKTGHAAAGPILDKPDLNGEKCSVKSDKECKPETDALALTEKLWEGILQLSSSVSVPAIALFKSGEKMQDFNWSESVEVKGKVRLEAFEKYVQGLPRSRTRGLMVMSLCWKEGSTDATRKSLEEVARKYKEGKRVGFAQRGRIDMYICPNSATIITILAKHGFFKGLTAVKVKGDPLIGCVVWRKNTSSVSVKQTSEVNTTPSGLSVSSPSVSSSLQVADEISTTGNKNQEPLTSSSEKDQKVNNGRDIGGRQNSPEFCVSPHDQPKQPTNNENKLVLISGTTTQISALKTVVELNKPNVPNQGAATSDVDDDLPEYDFRTAVSHTLTCRSSEVKTIADSRTEAEQFKDSHVPSPMSARRRSESSSVCRLSSDSHFQVLVPQNIENQSNFDTATLPIEQQKQITASSAILKPPDFAPKPMSVQMGVESSTISRPPPDSHFKVVPQNIELQSKCHVPTSPKEPPKQITASPKPAGFHFEGPFQVHRGHLPEIQLPSLPEKKQTGNCTAGPKPRNLFDDEDDDIPEWCPPDFTRPNQEVAQQARAPFALNHSKVPMPSHPVSAPGHAPSASSHSNMLMSGSVDSACGHLPSLPPSHPASISRKLQFRDKDQPSVPRFQKLLDDKPASNSSIDNDPDAPPGFAPNPAAVPCDPRRMKETIHLPHSRGMRR*

Click here to download the sequence:
Link to NCBI Protein BLAST