Transcript Information: S_Transcript_57157.p1


Annotated TAIR IDAT5G41770.1
Annotated Gene Namecrooked neck protein, putative / cell cycle protein, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16718021-16720936 | Forward length=705
E-Value9.3E-234
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3935682503299
Replicate 26.1187469706174
Replicate 37.0820106561026
Condition 2: 8 Hour
Replicate 18.2458175892914
Replicate 29.4856638232441
Replicate 38.9242348639522
Condition 3: 24 Hour
Replicate 17.1068687622733
Replicate 26.4063040722475
Replicate 36.9949136483522


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57157.p1 GENE.S_Transcript_57157~~S_Transcript_57157.p1 ORF type:3prime_partial len:375 (+),score=80.79,HAT|PF02184.12|24,HAT|PF02184.12|0.0036,HAT|PF02184.12|9.4,HAT|PF02184.12|0.14,HAT|PF02184.12|2.2e-14,HAT|PF02184.12|1.9,HAT|PF02184.12|4.5,HAT|PF02184.12|4.8e+02,HAT|PF02184.12|1.8e+03,HAT|PF02184.12|49,TPR_14|PF13428.2|8.6e+03,TPR_14|PF13428.2|0.024,TPR_14|PF13428.2|1.8,TPR_14|PF13428.2|0.93,TPR_14|PF13428.2|4.8,TPR_14|PF13428.2|0.021,TPR_14|PF13428.2|8.4e+03,TPR_14|PF13428.2|8.7e+02,TPR_16|PF13432.2|0.044,TPR_16|PF13432.2|0.66,TPR_16|PF13432.2|8.6,TPR_16|PF13432.2|0.92,TPR_16|PF13432.2|38,Suf|PF05843.10|2.4e+03,Suf|PF05843.10|4.3e-06,Suf|PF05843.10|0.0071,TPR_2|PF07719.13|0.69,TPR_2|PF07719.13|58,TPR_2|PF07719.13|4.5e+02,TPR_2|PF07719.13|0.64,TPR_2|PF07719.13|4.9e+03,TPR_19|PF14559.2|20,TPR_19|PF14559.2|3.3,TPR_19|PF14559.2|1.2 S_Transcript_57157:111-1232(+)
ATGGGTACATACAAGGAATCAGACCCTACATTAGGGTACCTGACAAATAAAGAAACGGAAGTGAAACTCCCTCGACCCACTCGAGTCAAGAACAAGACTCCTGCTCCCATTCAGATTACTGCTGAGCAGATTCTTCGTGAAGCTCGTGAACGCCAAGAATCTGAAATCCGCCCTCCCAAACAGAAGATTACTGATTCCACTGAGTTAGGAGAGTACCGTCTCCGAAAACGCAAGGAGTTTGAGGATTTAATTCGTAGAGTTCGTTGGAACACGAGTGTTTGGACAAAATATGCAAAACAGGAGGAGTCCCAGAATGATTTTAAGCGTGCTCGGTCTGTTTGGGAACGTGCGCTGGAGGTGGATTATAGGAACCATACCTTGTGGCTTAAGTATGCTGAGATGGAGATGAAGAACAAGTTTATAAACCATGCTCGTAATGTGTGGGATCGTGCAGTCTCCTTGCTGCCTAGAGTTGATCAGCTGTGGTATAAATATATTCATATGGAAGAGATGCTTGGGAATGTGGCTGCTGCGAGGCAGGTTTTCGAGAGATGGATGCAGTGGCAGCCTGATCAGCAAGGCTGGCTCTCTTATATTAACTTTGAGTTGCGTTACAATGAGATTGACAGAACAAGGGCAATTTATGAGCGCTTTGTGCAGTGTCATCCAAATGTTGCAGCATGGATCCGTTTTGCCAAGTTTGAGATGAAAATTGGGGAGATTGCTCGAGCTAGGAATTGTTATGAAAGAGCTGTTGACAAGTTGGCAGATGACCAAGAGGCTGACCTCTTGTTTGTGGCGTTTGCTCAGTTTAAGGAAATTTGCAAGGAGACAGAGCGTGCAAGATGTATCTATAAATTTGCCTTGGACCATACACCAAAAGGCCGAGCCGAAGAGGTTTACAATAAGTATGTTGCATTTGAGAAGCAGCATGGAGATAGGGAGGGCCTTGAAGATGCAATTGTAGGGAGAAGGAGATTTCAATACGAGGACCAGGTCCGAAGCAACCCTCTTAACTACGACACATGGTTTGATTACATTCGGTTAGAGGAGAGTGTAGGTATCAAAGAGCGTGTAAGACAAGTATATGAACGTGCAATAGCCAATATTCCTCCTGCTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57157.p1 GENE.S_Transcript_57157~~S_Transcript_57157.p1 ORF type:3prime_partial len:375 (+),score=80.79,HAT|PF02184.12|24,HAT|PF02184.12|0.0036,HAT|PF02184.12|9.4,HAT|PF02184.12|0.14,HAT|PF02184.12|2.2e-14,HAT|PF02184.12|1.9,HAT|PF02184.12|4.5,HAT|PF02184.12|4.8e+02,HAT|PF02184.12|1.8e+03,HAT|PF02184.12|49,TPR_14|PF13428.2|8.6e+03,TPR_14|PF13428.2|0.024,TPR_14|PF13428.2|1.8,TPR_14|PF13428.2|0.93,TPR_14|PF13428.2|4.8,TPR_14|PF13428.2|0.021,TPR_14|PF13428.2|8.4e+03,TPR_14|PF13428.2|8.7e+02,TPR_16|PF13432.2|0.044,TPR_16|PF13432.2|0.66,TPR_16|PF13432.2|8.6,TPR_16|PF13432.2|0.92,TPR_16|PF13432.2|38,Suf|PF05843.10|2.4e+03,Suf|PF05843.10|4.3e-06,Suf|PF05843.10|0.0071,TPR_2|PF07719.13|0.69,TPR_2|PF07719.13|58,TPR_2|PF07719.13|4.5e+02,TPR_2|PF07719.13|0.64,TPR_2|PF07719.13|4.9e+03,TPR_19|PF14559.2|20,TPR_19|PF14559.2|3.3,TPR_19|PF14559.2|1.2 S_Transcript_57157:111-1232(+)
MGTYKESDPTLGYLTNKETEVKLPRPTRVKNKTPAPIQITAEQILREARERQESEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNTSVWTKYAKQEESQNDFKRARSVWERALEVDYRNHTLWLKYAEMEMKNKFINHARNVWDRAVSLLPRVDQLWYKYIHMEEMLGNVAAARQVFERWMQWQPDQQGWLSYINFELRYNEIDRTRAIYERFVQCHPNVAAWIRFAKFEMKIGEIARARNCYERAVDKLADDQEADLLFVAFAQFKEICKETERARCIYKFALDHTPKGRAEEVYNKYVAFEKQHGDREGLEDAIVGRRRFQYEDQVRSNPLNYDTWFDYIRLEESVGIKERVRQVYERAIANIPPAE

Click here to download the sequence:
Link to NCBI Protein BLAST