Transcript Information: S_Transcript_57161.p1


Annotated TAIR IDAT5G41770.1
Annotated Gene Namecrooked neck protein, putative / cell cycle protein, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16718021-16720936 | Forward length=705
E-Value4.5E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1013186835038
Replicate 24.5334499090784
Replicate 37.0739261690523
Condition 2: 8 Hour
Replicate 16.0616691654864
Replicate 26.1292735999251
Replicate 35.1099634669476
Condition 3: 24 Hour
Replicate 17.1070682589262
Replicate 25.5883371010172
Replicate 36.3918879656801


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57161.p1 GENE.S_Transcript_57161~~S_Transcript_57161.p1 ORF type:3prime_partial len:292 (+),score=71.80,HAT|PF02184.12|18,HAT|PF02184.12|0.0026,HAT|PF02184.12|8.1,HAT|PF02184.12|0.019,HAT|PF02184.12|1.2e-13,HAT|PF02184.12|1.5,HAT|PF02184.12|1.4e+03,HAT|PF02184.12|4.1,TPR_14|PF13428.2|0.016,TPR_14|PF13428.2|3.5e+02,TPR_14|PF13428.2|0.37,TPR_14|PF13428.2|6.1,TPR_14|PF13428.2|0.004,TPR_16|PF13432.2|0.0053,TPR_16|PF13432.2|0.59,TPR_16|PF13432.2|17,TPR_16|PF13432.2|0.18,Suf|PF05843.10|7.6e-07,Suf|PF05843.10|0.11,TPR_2|PF07719.13|0.49,TPR_2|PF07719.13|13,TPR_2|PF07719.13|2.3e+02,TPR_2|PF07719.13|0.13,TPR_19|PF14559.2|2.7,TPR_19|PF14559.2|1.6,TPR_19|PF14559.2|1.8,TPR_11|PF13414.2|0.1,TPR_11|PF13414.2|1.6,TPR_11|PF13414.2|0.43 S_Transcript_57161:223-1095(+)
ATGGGTACATACAAGGAATCCGACCCTACATTAGGGTACCTCACAAAGAAAGAAACAGAAGTGAAACTCCCTCGACCCACTCGAGTCAAGAACAAGACTCCTGCTCCCATTCAGATTACTGCTGAGCAGATTCTTCTTGAAGCTCGTGAACTCCAAGAATCTGATATCCACCCTCCCAAACAGAAGATTGCTGATTCTACTGAGTTAGGAGAGTACCGCCTCCGAAAACGCAAGAAGTTTGAGGATTTGATTCGTAGAGTTCGTTGGAACACGAGTGTTTGGACAAAATATGCAAAACAGGAGGAGTCCCAGAATGATTTTAAGCGTGCTCGGTCTGTTTGGGAACGTGCGCTGGAGGTGGATTATAGGAACCATACCTTGTGGCTTAAGTATGCTGAGATGGAGATGAAGAACAATTGTATAAACCATGCACGTAATGTGTGGGATCGTGCAGTCTCCTTGCTGCCTAGAGTTGATCAGCTGTGGTATAAATATATTCATATGGAAGAGATGCTTGGGAATGTGGCTGCTGCGAGGCAGGTTTTCGAGCGATGGATGCAGTGGCAGCCTGATGACCAAGGCTGGCTCTCTTATATTAAGTTTGAGTTGCGATACAATGAGATTGATAGAACAAGGGCAATTTATGAGCGGTTTGTGCAGTGTCATCCAAAAGTTGGGGCATGGATTCGTTTTGCGAAGTTTGAGATGAAAAATGGGGAGATTGCTCGAGCTAGGAATTGTTATGAAAGAGCTGTTGACAAGTTGGCAGATGACGAAGAGGCTGAGCTGTTGTTTGTGGCGTTTGCTGAGTTTGAGGAAAAATGCAAGGAGACAGAGCGTGCAAGATGTATCTATAAATTTGCCTTGGACCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57161.p1 GENE.S_Transcript_57161~~S_Transcript_57161.p1 ORF type:3prime_partial len:292 (+),score=71.80,HAT|PF02184.12|18,HAT|PF02184.12|0.0026,HAT|PF02184.12|8.1,HAT|PF02184.12|0.019,HAT|PF02184.12|1.2e-13,HAT|PF02184.12|1.5,HAT|PF02184.12|1.4e+03,HAT|PF02184.12|4.1,TPR_14|PF13428.2|0.016,TPR_14|PF13428.2|3.5e+02,TPR_14|PF13428.2|0.37,TPR_14|PF13428.2|6.1,TPR_14|PF13428.2|0.004,TPR_16|PF13432.2|0.0053,TPR_16|PF13432.2|0.59,TPR_16|PF13432.2|17,TPR_16|PF13432.2|0.18,Suf|PF05843.10|7.6e-07,Suf|PF05843.10|0.11,TPR_2|PF07719.13|0.49,TPR_2|PF07719.13|13,TPR_2|PF07719.13|2.3e+02,TPR_2|PF07719.13|0.13,TPR_19|PF14559.2|2.7,TPR_19|PF14559.2|1.6,TPR_19|PF14559.2|1.8,TPR_11|PF13414.2|0.1,TPR_11|PF13414.2|1.6,TPR_11|PF13414.2|0.43 S_Transcript_57161:223-1095(+)
MGTYKESDPTLGYLTKKETEVKLPRPTRVKNKTPAPIQITAEQILLEARELQESDIHPPKQKIADSTELGEYRLRKRKKFEDLIRRVRWNTSVWTKYAKQEESQNDFKRARSVWERALEVDYRNHTLWLKYAEMEMKNNCINHARNVWDRAVSLLPRVDQLWYKYIHMEEMLGNVAAARQVFERWMQWQPDDQGWLSYIKFELRYNEIDRTRAIYERFVQCHPKVGAWIRFAKFEMKNGEIARARNCYERAVDKLADDEEAELLFVAFAEFEEKCKETERARCIYKFALDH

Click here to download the sequence:
Link to NCBI Protein BLAST