Transcript Information: S_Transcript_57175.p1


Annotated TAIR IDAT3G53230.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19723416-19726489 | Forward length=815
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.276572369661
Replicate 220.486876017692
Replicate 317.56451055581
Condition 2: 8 Hour
Replicate 121.325390317133
Replicate 228.763805393934
Replicate 320.63915403022
Condition 3: 24 Hour
Replicate 121.671511399399
Replicate 218.526766606062
Replicate 323.620644760347


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57175.p1 GENE.S_Transcript_57175~~S_Transcript_57175.p1 ORF type:complete len:126 (+),score=26.75 S_Transcript_57175:2040-2417(+)
ATGAGATCAACAACTTCTCTGAAGAGTGAGGAATGCATAAGAGAGATTGAAAAACTTAAAGTTGGCTTTCTCTTGGATTTTGACCCTCATGAATCTTTTAGTTTCTCTTCTGTTTCCAAGCTTCAAATCAAGATAATGATGCTCCTGGTATCTTGGTTGTGGCTTAATAAGGCCAGCAGGTGGCATGCAGTTCCGCATTCAAGACATCAGTGGAAAATATGTCCATCTGCAAAGACACCCCGTGAGAGCTATTGCAAATTGCATGGAAGTTCAGTTGGAGATGCAGGAGGAGTAAAAGACATGGTGTTGGACCAGCTGCTGACTGAGATGGATGGGATTAACTTCTGTATGAAACCTTCATCTAAAGGGTTGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57175.p1 GENE.S_Transcript_57175~~S_Transcript_57175.p1 ORF type:complete len:126 (+),score=26.75 S_Transcript_57175:2040-2417(+)
MRSTTSLKSEECIREIEKLKVGFLLDFDPHESFSFSSVSKLQIKIMMLLVSWLWLNKASRWHAVPHSRHQWKICPSAKTPRESYCKLHGSSVGDAGGVKDMVLDQLLTEMDGINFCMKPSSKGLK*

Click here to download the sequence:
Link to NCBI Protein BLAST