Transcript Information: S_Transcript_57177.p1


Annotated TAIR IDAT3G53230.1
Annotated Gene NameATPase, AAA-type, CDC48 protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19723416-19726489 | Forward length=815
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.42580801976289
Replicate 20
Replicate 30.1475418886688
Condition 2: 8 Hour
Replicate 10.85301561268532
Replicate 20.71589915647125
Replicate 31.193687465879
Condition 3: 24 Hour
Replicate 10
Replicate 20.36262098522156
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57177.p1 GENE.S_Transcript_57177~~S_Transcript_57177.p1 ORF type:complete len:125 (+),score=23.67 S_Transcript_57177:1054-1428(+)
ATGAGATCAACAACTTCTTTAAAGAATAAGGAAAGCATAAGAGAGATTGAAAAACTTGAAGTTGGCTTTCTCTTCGATTTTGACGCTTATGAATCTTTTAGTTTCTCTTCTGTTTCCAAGCTTCAAATCGAGATAATGACGCTCCTGGTATCTTCATTGTGGCTTAATAAGGCCAGGTGGCTTGCAGTTCCGCATTCAAGACATCAGTGGAAAATATGTCCATCTGCAAAGACACCCCGTGAGAGCTATTGCAAATTGCATGGAAGTTCAGTTGGAGATGCAGGAGGAGTAAAAGACATGGTGTTGGACCAGCTGCTGACTGAGATGGATGGGATTAACTTCTGTATGAAACCTTCATCTAAAGGGTTGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57177.p1 GENE.S_Transcript_57177~~S_Transcript_57177.p1 ORF type:complete len:125 (+),score=23.67 S_Transcript_57177:1054-1428(+)
MRSTTSLKNKESIREIEKLEVGFLFDFDAYESFSFSSVSKLQIEIMTLLVSSLWLNKARWLAVPHSRHQWKICPSAKTPRESYCKLHGSSVGDAGGVKDMVLDQLLTEMDGINFCMKPSSKGLK*

Click here to download the sequence:
Link to NCBI Protein BLAST