Transcript Information: S_Transcript_57248.p1


Annotated TAIR IDAT4G25620.1
Annotated Gene Namehydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13067447-13069296 | Reverse length=449
E-Value2.1E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1801462258259
Replicate 24.1334179949602
Replicate 34.8013935789422
Condition 2: 8 Hour
Replicate 15.7075253890137
Replicate 26.0420321143787
Replicate 35.1863376167838
Condition 3: 24 Hour
Replicate 15.687110787089
Replicate 25.238593916674
Replicate 34.1116228105664


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57248.p1 GENE.S_Transcript_57248~~S_Transcript_57248.p1 ORF type:complete len:411 (+),score=78.98 S_Transcript_57248:550-1782(+)
ATGGCAAGTGTGAACAGCAGCGTAGAAACCGTAAATGCAGCAGCAGCTGCGATCGTAACTGCCGAAAATCGTGTTCAACCTGTTTCAGTTCAGAAGAGGAGATGGGGAAGCTGCTGGAGTCTATACTGGTGTTTTGGGTCTCTCAAAACCAGCAAGAGGATTAGTCATGCTGCCCTTGTCCCTGAGCCTGCTGTTCCTGAGAATGCTGTGGCCGTTGCCGACAATCCAAACCCTTCTACCTCCATAATACAGCCTTTTATTGCTCCTCCATCCTCTCCTACATCCTTCCTGCAATCAGATCCTCCCACCGCAATCCACTCACCCGGTGGATTGCTTACCCTGACTTCACTTGCTGGGCAGACCCACATTTTCACCATTGGTCCCTATGCGCATGAGACCCAACTTGTCTCTCCCCCTGTATTTTCCGCTGTTACCACAGAGCCATCGACTGCTGCTGTGACTCCACCTACTGAGCCTGTGCAGTATACAACGCCATCGTCACCTGAAGTACCATTCGCTCAATTGCTCACTTCTTCACTCAGCCGTGCTAGGAGGAGGAACAGTGGGGGTAATCAGAAACTTGCACTATCATGCTATGAAGTCCACCATCTCATATCCCCTGGCTCCGCAAATTCCGCATCTGGCACATCTTCTCCTTACCCTGATAAGCGCCCACTTCTTGAGTTCCGCATGGGAGATGCTTCCAAGTTGTTCGACTCAAAGAAATTTTCTACTCATAAGTGGGGTTCAAGACTAGGGTCCGGATCTCTAACTCCAGATGGCGCGGGACTTGCCTCTTTTGACGGCGTGCCTATGGATACCCAAATCTCCGAGGTGGCATCTCCAGCTAACTCAGAAACTGGATCATTGATTGATGAGGCAGTAGTTGATCCTAGAGTCTCATTTGAGCTTAGTCGTGAAGATATTCTGATGCTTCCTGAGAAAACAAAATTCAAAGTACAAAACGAGAAACAGGAAGTTGTTGATCAATCAAGAAGGGCAAATGATGTAAACCCCGAGACGTCGTTTAGTGAGTTGAAGGATTGCCAACACAAAAGGTCCTCTTTCTCCCTTGGATCAGTCAAAGAATTCAATTTTGACAGCAGCGAGAGAGAAATCCATGTTGACTCAACCCCTAGCTCAGAATGGTGGACAGATGAGAAGGTTGGGAAGGGCATTGGCTCTGATAACAACTGGACTTTCTTTCCGTTGCTTCAGCCTGGAGTAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57248.p1 GENE.S_Transcript_57248~~S_Transcript_57248.p1 ORF type:complete len:411 (+),score=78.98 S_Transcript_57248:550-1782(+)
MASVNSSVETVNAAAAAIVTAENRVQPVSVQKRRWGSCWSLYWCFGSLKTSKRISHAALVPEPAVPENAVAVADNPNPSTSIIQPFIAPPSSPTSFLQSDPPTAIHSPGGLLTLTSLAGQTHIFTIGPYAHETQLVSPPVFSAVTTEPSTAAVTPPTEPVQYTTPSSPEVPFAQLLTSSLSRARRRNSGGNQKLALSCYEVHHLISPGSANSASGTSSPYPDKRPLLEFRMGDASKLFDSKKFSTHKWGSRLGSGSLTPDGAGLASFDGVPMDTQISEVASPANSETGSLIDEAVVDPRVSFELSREDILMLPEKTKFKVQNEKQEVVDQSRRANDVNPETSFSELKDCQHKRSSFSLGSVKEFNFDSSEREIHVDSTPSSEWWTDEKVGKGIGSDNNWTFFPLLQPGVS*

Click here to download the sequence:
Link to NCBI Protein BLAST