Transcript Information: S_Transcript_57278.p1


Annotated TAIR IDAT1G10390.1
Annotated Gene NameNucleoporin autopeptidase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3407265-3412045 | Reverse length=1041
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.432963186019
Replicate 214.103090661462
Replicate 314.87029325869
Condition 2: 8 Hour
Replicate 116.755663820605
Replicate 217.767473011696
Replicate 316.206237646402
Condition 3: 24 Hour
Replicate 115.52414843702
Replicate 212.155046644457
Replicate 313.160655131483


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57278.p1 GENE.S_Transcript_57278~~S_Transcript_57278.p1 ORF type:5prime_partial len:826 (+),score=196.03,Nucleoporin2|PF04096.10|1.9e-42 S_Transcript_57278:1-2478(+)
CCCGCTTTTGGTGCTACTACCACCCCCGCTTTTGGTGCTACCACCACCCCCGCTTTTGGTGCTACTACCACCCCCGCTTTTGGTGCTACCACCACCCCCGCTTTTGGTGCTACTACCACCCCCGCTTTTGTTGCTACTTCCACTCCCGCCTTTGGTGCTACTACCACTCCTGCTTTTGGGGCTTCCACCAGTCCAGCTTTTGGGTCAAGTGCACCATCTTTTAGTTTTGGATCCAATAATGCCTTTGGGCAGTCCACCTCTGCTTTCGGAAGCACTCCTTTTGGTTCCACACCGTCTCCTTTTGGTGCCCAGAGTTCTGCGTTTGGAGCACAAGGTAATACTCCATCTTTTGGGAGCGGTGGCTTTGGACAGTCAACTTTAGGAGGTCAACAGGGTGGAAGTAGAGTTGCTGCTTATACTCCTACTCCTGAGGCAGAAGGTGGCAGTACAGGTGGAAAGCTGGAGTCAATATCTGCCATGCCAGTTTACAAAGATAAAAGCCATGAGGAGCTTAGATGGGAGGATTACCAGCGAGGTGATAAAGGTGGACCTAATCCCGCTGGTCAATCTACTCCTGCTATGGGATTTGGTGTGTCTACTGCCCAATCAAACCCTTTCAGCTCCTCACCAGCATTTGGCCAATCATCGTCAAGTCTATTTTCTACAACTGCTCAATCCAACCCTTTTGCTCCAAAACCTGCTGGCTTTGGTGCCACTGGTTTTGGAACTACGTCTACCCCGGCATTTGGCTCCTCTCCATTTGTTAGTACATCCACCTCCTCCCCTTTTGGGTCAACATCAACACCAACATCGTCCCTTTTTGCAACATCAGATCCAGGATTTGGATCCAGCAGTTCTTCTATTTTTGGTGCACCAAATTCGTCCTCCATTGGATCTTCATCTATATTTGGATCAACACCTACTCAAGGAACCACTGCATTTGGTTCCACATTGGGCTTTGGGAATACTCAGTCATCCCCATTGTTCCAGTCATCTCCTTCAATTGTGCAGACAGGAGCTACTTTCGGGCAATCTGGTTCTTCCTTTGGACAGAGCAGTGGGTTTGCACAGTCAAGTATTTTCAATACAAGTTCATCTGGTTTTGGGTCGAATTTGTTCTCAAGTACCCCTTCATTTTCTACGAATAGCCAATTGGGTTTTCCTCAATCAAGTCCCTCTCTTTCAACTCCTTTTCAACAAACACTTCCCACACAAACAAGCAGTGCTTTCAACTTTAGCAATTTTGGTCAGACGCAATCAGCTGGCATAGGTGGCTTTGGTTCAAGCATGTTCGGGCAGAATCTTGGCCAATTGTCTACGAATCAGCCCACTGCTGCTGCACAGCCAGTTGCAGTCACAAATCCTTTTGGGACCCTTCCAGCAATGCCTCACATGTCAATTGGAAACACTGGAGCATCACCCTCAATTCAGTATGGAATTTCTAGCTTGCCGGTTGTTGACAAGCCTACCCCTGTCAGGATATCTTCTTTGTTAACATCACGACATTTGTCCCAGAGACGGATTAGGCTACCTGCAAGGAAATATCATCCAAAGAATGATGGTTCAAGGGTTCCTTTTTTCAGTGATGACGAAGAAGGACCAAGCACTCCAAAGGCAGATGCTCTTTTCATTCCATGGGAAAATCCTAGAGCTTTGGTTATTAGGCCGATTGATCAGTGGACTTTAAAATCATCCATGAAGGATGCTTGTGTACTGGTGCATGAAAATGGTAAAACATCAAAAGATGATGGCCATTTCCCCAATGGAGACCTTGCTTCAGGGAAGGACAACATTGCCAGAGAGAATGGATCTGTGACGGAACGAAGTCATCCTATTAAAATCAACCAGAAGCCTGGTGGTCTCTCTGATGATTCCCTTAACCATAAAGGAGATTCATACATTACGCTTTCTGGACACAGAGCTGGTGAGGCTGCAATTGTATATGAGCATGGGGCTGATATAGAAGCAATGATGCCAAAACTTCGGCACTCAGACTATTATACTGAGCCCCGGATCCAAGAGCTGGCTGCCAAGGAAAGGGCTGAACCAGGGTTCTGCAGGCACGTGAAAGACTTTGTTGTAGGGAGGCAGGGTTTCGGAAGCATCAAATTTCTTGGCGAGACTGATGTGCGGCGTCTCGATCTCGAGTCTCTTGTCCAGTTCAACAATCGAGAGGTAATCGTTTACATGGATGACAGCAAGAAACCCCCAGTCGGTCAAGGCCTCAACAAGCCTGCTGAAGTAACGCTGCTGAACATCAAGTGTTATGACAAAAAGACTGAAAAGCAGATCTCGGAAGGGCCCAAAATTGAGAAATACAAAGAGATGCTCAAGAAAAAGGCGGAGGATCAAGGGGCTGACTTTTTGTCTTATGACCCTGTCAAAGGAGAGTGGAAAATTAGGGTCAGCCATTTCAGCAAATACAGGTTTCACGAGGAAGATCAGTGGTATATTGATGATATTGCTGTTTTCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57278.p1 GENE.S_Transcript_57278~~S_Transcript_57278.p1 ORF type:5prime_partial len:826 (+),score=196.03,Nucleoporin2|PF04096.10|1.9e-42 S_Transcript_57278:1-2478(+)
PAFGATTTPAFGATTTPAFGATTTPAFGATTTPAFGATTTPAFVATSTPAFGATTTPAFGASTSPAFGSSAPSFSFGSNNAFGQSTSAFGSTPFGSTPSPFGAQSSAFGAQGNTPSFGSGGFGQSTLGGQQGGSRVAAYTPTPEAEGGSTGGKLESISAMPVYKDKSHEELRWEDYQRGDKGGPNPAGQSTPAMGFGVSTAQSNPFSSSPAFGQSSSSLFSTTAQSNPFAPKPAGFGATGFGTTSTPAFGSSPFVSTSTSSPFGSTSTPTSSLFATSDPGFGSSSSSIFGAPNSSSIGSSSIFGSTPTQGTTAFGSTLGFGNTQSSPLFQSSPSIVQTGATFGQSGSSFGQSSGFAQSSIFNTSSSGFGSNLFSSTPSFSTNSQLGFPQSSPSLSTPFQQTLPTQTSSAFNFSNFGQTQSAGIGGFGSSMFGQNLGQLSTNQPTAAAQPVAVTNPFGTLPAMPHMSIGNTGASPSIQYGISSLPVVDKPTPVRISSLLTSRHLSQRRIRLPARKYHPKNDGSRVPFFSDDEEGPSTPKADALFIPWENPRALVIRPIDQWTLKSSMKDACVLVHENGKTSKDDGHFPNGDLASGKDNIARENGSVTERSHPIKINQKPGGLSDDSLNHKGDSYITLSGHRAGEAAIVYEHGADIEAMMPKLRHSDYYTEPRIQELAAKERAEPGFCRHVKDFVVGRQGFGSIKFLGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCYDKKTEKQISEGPKIEKYKEMLKKKAEDQGADFLSYDPVKGEWKIRVSHFSKYRFHEEDQWYIDDIAVFC*

Click here to download the sequence:
Link to NCBI Protein BLAST