Transcript Information: S_Transcript_5729.p1


Annotated TAIR IDAT2G21940.4
Annotated Gene Nameshikimate kinase 1
Annotated Gene Symbol(s)SK1, ATSK1
Annotation TypeHomolog
Chromosome Positionchr2:9351106-9352881 | Forward length=304
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1309413217859
Replicate 23.1147467610609
Replicate 34.0140072652542
Condition 2: 8 Hour
Replicate 15.1431823706027
Replicate 22.5003830832636
Replicate 33.6362328267321
Condition 3: 24 Hour
Replicate 14.2404773834683
Replicate 21.7331150028972
Replicate 32.5222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5729.p1 GENE.S_Transcript_5729~~S_Transcript_5729.p1 ORF type:complete len:170 (+),score=24.55,AAA_18|PF13238.2|5.1e-06 S_Transcript_5729:406-915(+)
ATGGAGGCTAAACTTGTTCAAAGCATTCGGCCTTGTGCTTGGATGGATACACGAAAAATGATGAAAAGTCCCAGTGGGTTGACCTGGGTATCTCCAAGAACTAAGGAAAAACAAGGGATTCAGATAATGGCTATACGATCGAGTAAGAGCTCGGTTTGTCACAAGCCACTTGCTTTAAGGGTTTCATGTTCTTTGAAAAATTCTCAAGGTTCTGTGGTGGAGTCTGGTGCCTTTGCTACTTCGCTGAACGAGTCTGTAGTCTTGAAGAATAAGGCACACGATATTGAGCCATATTTAGATGGACGCTGCATATACCTTGTTGGTATGATGGGCTCTGGAAAGACAACGATTGGCAAGATTTTGTCAGAAGCTCTTGATTATTCGTTCTCTGATAGGTTTGTTCTTGGCATTTTATGGATGGTTTCTGGAAGCAATATTATAGTTAGATTTAACCTGACAGGAAAGCCTGCATGTATCTGCCGTTCTGTTTTAGGGATTTGTCGCTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5729.p1 GENE.S_Transcript_5729~~S_Transcript_5729.p1 ORF type:complete len:170 (+),score=24.55,AAA_18|PF13238.2|5.1e-06 S_Transcript_5729:406-915(+)
MEAKLVQSIRPCAWMDTRKMMKSPSGLTWVSPRTKEKQGIQIMAIRSSKSSVCHKPLALRVSCSLKNSQGSVVESGAFATSLNESVVLKNKAHDIEPYLDGRCIYLVGMMGSGKTTIGKILSEALDYSFSDRFVLGILWMVSGSNIIVRFNLTGKPACICRSVLGICRY*

Click here to download the sequence:
Link to NCBI Protein BLAST