Transcript Information: S_Transcript_57300.p1


Annotated TAIR IDAT1G07380.1
Annotated Gene NameNeutral/alkaline non-lysosomal ceramidase
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2264829-2268306 | Reverse length=779
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.811586788035
Replicate 250.489845333543
Replicate 343.174918062378
Condition 2: 8 Hour
Replicate 165.015100223259
Replicate 260.174536469418
Replicate 365.887831507192
Condition 3: 24 Hour
Replicate 156.964734640857
Replicate 252.126766625599
Replicate 352.319574163433


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57300.p1 GENE.S_Transcript_57300~~S_Transcript_57300.p1 ORF type:complete len:780 (+),score=153.89,Ceramidase_alk|PF04734.9|8.2e-233,Ceramidse_alk_C|PF17048.1|1.7e-55 S_Transcript_57300:464-2803(+)
ATGAAGATGCTTTGTATCTCTGGTCTCCTTCGATGGGGAACGTGGCTTTGGATTTCACTTTTATCGCTACCATTGAGTTGCAAAGGAGAATCTTCAGCTTCCAATTATTTAATTGGGCTTGGAAGCTATGATATTACAGGACCAGCTGCTGATGTTAACATGATGGGATATGCAAATATTGAACAGATTGCATCTGGACTCCACTTTAGGTTGCGTGCTCGCACGTTTATTGCAGCTGAACCAAATGGGAAACGCATAGCTTTTGTAAATCTTGATGCTTGCATGGCCTCACAAATCGTGACTATCAAAGTGCTTGAAAGGCTGAAAGCAAGGTTTGGGGACCTGTACACTGAAGAAAATGTTGCTATTAGTGGCATTCACACACATGCTGGTCCTGGAGGTTATCTGCAGTATGTTGTATATATTGTCACGTCCCTTGGATTTGTACGTCAATCCTTTGATGCTCTTGTTGATGGTATTGAGCAAAGCATCATACAAGCTCATGAAAACTTGAGGCCATGTTCCATTTTTGTGAATAAAGGGGAGATTCTTGATGCTGGTGTTAATCGTAGTCCCAGTGCTTATTTAAACAATCCCGCTGAAGAACGCAATAAATACAAGTATAATGTTGACAAGGAAATGACTCTTTTGAAGTTTGTAGACAAGGACTGGGGGCCAGTTGGCAGTTTCAACTGGTTTGCAACCCATGGAACTTCCATGAGCCGTACAAATTCATTGATAAGTGGGGATAACAAAGGAGCAGCTGCAAGATTTATGGAGGACTGGTTTGATGGGGACAATGTTGGGAGTGTTTTTACTGATGAATCAATTGCGGAGTCTAAAGAAAGGATTCCTAGGCGAATTTCCAACATCATTCCTGTCGATCATGAAAACCATCGTGAATTATTGGACCTTGCTGCTTTGTTCCAGGCTTCTTCTAAGCGAGAAGTGACCAAGTATTTGAGCATTTCTAGGCGTGTCCGAAGTGTTCTCAGGCAGGGTCAGAAGCCTAGATTTGTATCTGCATTTTGCCAGTCAAACTGTGGTGATGTCAGTCCCAATGTGCTTGGTGCATTTTGCATTGACACAGGGCTTCCCTGTGAATTCAATCATAGTACATGTGGTGGGAGGAATGAGCTATGCTATGGACGAGGACCAGGTTACCCAGATGAATTTGAGAGCACACGCATTATTGGGGAGAGGCAATTCAGGAAAGCTGTAGATCTCTTTAAGACAGCATCTGAGCAGATAAAAGGGAAGATTGATTATCGTCATGCTTATGTAGACTTCTCCAATCTTGAGGTGACAATCTCTAAAGAGGGAGGTGACACTGAAGTAGTGAAAACATGTCCAGCTGCCATGGGTTTTGCCTTTGCTGCTGGCACTACGGATGGACCTGGAGCTTTTGATTTTAAGCAGGGAGATGACAAGGGAAACCCTTTCTGGAAAGTAGTGCGTGATGTCCTGAAAACGCCGAACAAAAGGCAGGTTGAGTGTCATCGCCCAAAACCTATTTTACTGGATACTGGTGAAATGAAGGTGCCATATGATTGGGCGCCTGCAATACTTCCGGTCCAGATCTTGCGAATCGGGCAGTTTGTCATCCTCAGTGTGCCATCAGAGTTCACAACAATGGCTGGTAAGCGTCTCCGTGATGCTGTGAAGATGGTCCTTCAGAGCGCACCTAATGGAGAATTCAATGGTGGTGTTCATGTTGTCATAGCAGGATTGACAAATACATATTCACAGTACGTTACCACCTATGAGGAGTACCAGGTCCAAAGATATGAGGGTGCATCTACTTTGTATGGTCCACACACACACAGTGCCTTCATTCAGGAATTCAAGAAGCTTGCAACAGCCCTTATCCATGGCCAAAGTGCTGAACGAGGGCCTCAGCCACCAGATCTCCTGAACAAGCAACTAAGCTTCCTTACACCAGTCGTCATGGACATGACTCCACTCGGTGTCCACTTTGGAGATTGCCGAGCTGATGTTCCAAAGAATGCAACCTTCAAGAGAGGCGATATGGTGAGTGTTGTTTTCTGGTCAGCCTGCCCAAGAAATGATCTCAGGACTGAAGGCACCTTTGCACTGGTGGAGACCCTCCATGGGAAGGACACATGGGAACCAGTCTATGATGATGACGATTTCTGTCTCCGTTTTAAGTGGTCCAGGCCTGCAAAACTCAGCACACGAAGTTACGCCACAATAGAGTGGAGGATCCCACAAGCTGCACAGCCTGGTGTGTATAGAATACGGCATTTTGGTGCCTCAAAGGGGCTTTTTGGGTCGATCCACCATTTCGAGGGTTCATCCAGCGCATTTGTGGTTGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57300.p1 GENE.S_Transcript_57300~~S_Transcript_57300.p1 ORF type:complete len:780 (+),score=153.89,Ceramidase_alk|PF04734.9|8.2e-233,Ceramidse_alk_C|PF17048.1|1.7e-55 S_Transcript_57300:464-2803(+)
MKMLCISGLLRWGTWLWISLLSLPLSCKGESSASNYLIGLGSYDITGPAADVNMMGYANIEQIASGLHFRLRARTFIAAEPNGKRIAFVNLDACMASQIVTIKVLERLKARFGDLYTEENVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEQSIIQAHENLRPCSIFVNKGEILDAGVNRSPSAYLNNPAEERNKYKYNVDKEMTLLKFVDKDWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFDGDNVGSVFTDESIAESKERIPRRISNIIPVDHENHRELLDLAALFQASSKREVTKYLSISRRVRSVLRQGQKPRFVSAFCQSNCGDVSPNVLGAFCIDTGLPCEFNHSTCGGRNELCYGRGPGYPDEFESTRIIGERQFRKAVDLFKTASEQIKGKIDYRHAYVDFSNLEVTISKEGGDTEVVKTCPAAMGFAFAAGTTDGPGAFDFKQGDDKGNPFWKVVRDVLKTPNKRQVECHRPKPILLDTGEMKVPYDWAPAILPVQILRIGQFVILSVPSEFTTMAGKRLRDAVKMVLQSAPNGEFNGGVHVVIAGLTNTYSQYVTTYEEYQVQRYEGASTLYGPHTHSAFIQEFKKLATALIHGQSAERGPQPPDLLNKQLSFLTPVVMDMTPLGVHFGDCRADVPKNATFKRGDMVSVVFWSACPRNDLRTEGTFALVETLHGKDTWEPVYDDDDFCLRFKWSRPAKLSTRSYATIEWRIPQAAQPGVYRIRHFGASKGLFGSIHHFEGSSSAFVVV*

Click here to download the sequence:
Link to NCBI Protein BLAST