Transcript Information: S_Transcript_5738.p2


Annotated TAIR IDAT1G53800.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20081888-20084320 | Forward length=572
E-Value8E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4041981581985
Replicate 213.450042831854
Replicate 310.256922741682
Condition 2: 8 Hour
Replicate 111.289912520835
Replicate 29.4512087836278
Replicate 35.5854360034443
Condition 3: 24 Hour
Replicate 111.331303201003
Replicate 28.3625828811121
Replicate 310.925056667457


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5738.p2 GENE.S_Transcript_5738~~S_Transcript_5738.p2 ORF type:complete len:187 (+),score=35.09,NUMOD3|PF07460.7|5.4e-08 S_Transcript_5738:315-875(+)
ATGCCTTTATTGGATATTGCTGTTGCACAATCTTCTTTCCAGAACTATATAAGCTACCCAAGGTGGCGGCTCTTTATTAATGGTAAAGGACCAAATTACTCTCTTTTACAATATGAGGAACGATGGACATCATTTCAGAAGTCCTTACAAAATCCTGGGAACTTGAACATTCATTTGGTTCATTGTAAGAAGTCACATCCTAAATTCCTTATTAAAGCCGTTGCTACTTTGGAGCCAAAATGTCCTGTCCAGAGTAAAGATGGAAAGAAGGAAGGCAAAGTATTGTCATCTACTGTTCAATCATTGTCCTCAACAGATCGTAGTGAATCTGAAGCTGAGGATCCAGAGGAAGTAGAAGACAAAGAAAGGTTGAGACGCTTGCGGATTTCCAAAGCAAATAAGGGAAACACACCATGGAACAAAGGGAAAAAGCACAGTCCAGAAACTCTTCAACGTATCCGGGAGAGGACAAGACTTGCTATGCAGAACCCTAAGGTGAAGTCATGTAAGAATAATTTAAGAATTTCAATTGTATTTTGGGGGTGGGGTTGTCTGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5738.p2 GENE.S_Transcript_5738~~S_Transcript_5738.p2 ORF type:complete len:187 (+),score=35.09,NUMOD3|PF07460.7|5.4e-08 S_Transcript_5738:315-875(+)
MPLLDIAVAQSSFQNYISYPRWRLFINGKGPNYSLLQYEERWTSFQKSLQNPGNLNIHLVHCKKSHPKFLIKAVATLEPKCPVQSKDGKKEGKVLSSTVQSLSSTDRSESEAEDPEEVEDKERLRRLRISKANKGNTPWNKGKKHSPETLQRIRERTRLAMQNPKVKSCKNNLRISIVFWGWGCLV*

Click here to download the sequence:
Link to NCBI Protein BLAST