Transcript Information: S_Transcript_574.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0007
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53583223963451
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.1431234249472
Replicate 20
Replicate 30.28611875979841
Condition 3: 24 Hour
Replicate 10.14660995631271
Replicate 20.60842447184825
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_574.p1 GENE.S_Transcript_574~~S_Transcript_574.p1 ORF type:5prime_partial len:149 (+),score=12.18,RVT_1|PF00078.23|1.9e-11 S_Transcript_574:2-448(+)
CCTAGGGTGTGGTTTTCTTCATCACGAGGACTGCGACTAGGGGACCCGTTGTCTTCTCTCCTGTTTACTCTGGTGGTGGATGTTTTGAGTAGGTTGTTGGTCAGAGATGTGGCTAGAGGTGTGATCTCGGGTTTCTTGGTAGGTATGGAAGGAGTGCAGGTTTCCCATTTACAGTATGCGGATGATACGATCCTCTTTCTCGGGGCCGATTTGGAGCAGTTCCGTCAGGGTCTCACTATTTTACAACTGTTTGAGATCGTTTCTGGTATGAGGATTAACTTAGGTAAGTGCAGTTTGGCCGGGGTTAATGTGGAGATGGAGACACTTGTGACTTTTGCGGAGAGTGCGGGGTGCCATATCGAGGGTTGGCCGGCCTTTGCCCTATTTGGGTGTTCCGCTTGGGGGCAATCCTCGAGGGGTTGCTTTTTGGGAGCCTGTGGTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_574.p1 GENE.S_Transcript_574~~S_Transcript_574.p1 ORF type:5prime_partial len:149 (+),score=12.18,RVT_1|PF00078.23|1.9e-11 S_Transcript_574:2-448(+)
PRVWFSSSRGLRLGDPLSSLLFTLVVDVLSRLLVRDVARGVISGFLVGMEGVQVSHLQYADDTILFLGADLEQFRQGLTILQLFEIVSGMRINLGKCSLAGVNVEMETLVTFAESAGCHIEGWPAFALFGCSAWGQSSRGCFLGACGE*

Click here to download the sequence:
Link to NCBI Protein BLAST