Transcript Information: S_Transcript_5740.p1


Annotated TAIR IDAT1G53800.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20081888-20084320 | Forward length=572
E-Value1E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.306186486102
Replicate 241.93815724437
Replicate 340.416389160985
Condition 2: 8 Hour
Replicate 135.870400123178
Replicate 239.389750596442
Replicate 332.247051504972
Condition 3: 24 Hour
Replicate 138.312564891196
Replicate 240.097512788922
Replicate 335.78512283119


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5740.p1 GENE.S_Transcript_5740~~S_Transcript_5740.p1 ORF type:complete len:585 (+),score=134.25,NUMOD3|PF07460.7|2.5e-07,NUMOD3|PF07460.7|3.7e+02,NUMOD3|PF07460.7|1.4e+03 S_Transcript_5740:315-2069(+)
ATGCCTTTATTGGATATTGCTGTTGCACAATCTTCTTTCCAGAACTATATAAGCTACCCAAGGTGGCGGCTCTTTATTAATGGTAAAGGACCAAATTACTCTCTTTTACAATATGAGGAACGATGGACATCATTTCAGAAGTCCTTACAAAATCCTGGGAACTTGAACATTCATTTGGTTCATTGTAAGAAGTCACATCCTAAATTCCTTATTAAAGCCGTTGCTACTTTGGAGCCAAAATGTCCTGTCCAGAGTAAAGATGGAAAGAAGGAAGGCAAAGTATTGTCATCTACTGTTCAATCATTGTCCTCAACAGATCGTAGTGAATCTGAAGCTGAGGATCCAGAGGAAGTAGAAGACAAAGAAAGGTTGAGACGCTTGCGGATTTCCAAAGCAAATAAGGGAAACACACCATGGAACAAAGGGAAAAAGCACAGTCCAGAAACTCTTCAACGTATCCGGGAGAGGACTAGACTTGCTATGCAGGACCCTAAGGTGAAAATGAAATTGGCGAATAAGGGTCATGCTCAAAGCATAGAGACTAGAGAAAAAATTGCAGCTGGAGTGCGAATGGGCTGGCAAAGACGCCGTGAGAAGCTTCTGCTTCAGGAAACTTGCTTATTTGACTGGCAGAACCTAATTGCTGAAGCTGCTAGAAAAGGCTTTTACAATGAAGAGGAGCTGCAATGGGATTCCTACAAGATCTTGAATGACAAGTTGCAGCAGGAGTGGTTGGCTAGCATAGAATATAGAAAATCAATACCTAGAACCAAAGGTAGCAAGAGAGCACCAAAGTCTGCTGAACAACGGAGAAAAATTGCGGAGGCCATTGCTGCTAAATGGGCTGACCCCGAATACCGCTCAAAGGTCTGTTCTGGCTTAGCTAAATATCATGGAACACCAGAGGGGGCTGAAAGAAAGGCAAGAAGGAAGCCAAGTGGCGAGGGACGGTCCACAAGAACTTCCAAGAGAAATGTTGGGGCAGAAAAATCTTCCGAAATTGAAATGAAGTTGAGGTCTCAACAATCCAAGTTGAAGAAAAGGACGGCCCCAAAGTACAAAGATCCTTTGGCAAAAACCAAACTGGAAATGCTCAAGAGTATTAGGGCACAGAGGCTGACATCAGAAACGAAGAAGAATGAAGCCTTGCAACGAGCAAGACTGCTGATAGCAGAAGCTCAAAAGGCTGCAAAGGCTCTCGAAGTTGCTGCGACAAAAAGCCCTGTTGCTCAAGCTTCACTCGTTGAGTCAAGAAAACTCATTGCCGAAGCCATTGAATCAATCAAATCAATTGAGAGTGGGGGGCTCACTTCTCAAGATGATCTTGCATCTGAGAATCAGAATTTTGTCGGAAACCATGAAGAGGTCCTCACAGTTACAGAAGAAGACAATGAGCTACCTCAAAGGGGGTTGAACGGCATTGCTTCTGTGCAAACAAGTGAAGGCCACAATTCCGATTTAAACCTCTACAGCCTGACAATGCTTGACAAAATGGACAGAAACTATCAGCCGCCAACGAGTCTCAGTGGGTGTGAATTACCTAAGCTCGAACTAGATAATTTCATAGGGAATTCAGATTCAGGAGAGTTCACACGTCAACATCAACCTGATTCAAACGGTACTATCAGATTGAATGGCGTTTCTTCATACAACGGAGCTAAGTTGCAATTTCAAAAAGAGCAGACATCTGCTGTGAAAACAGCGACCAAGAAATGGGTTCGCGGGAGGCTCGTTGAAGTTGCAGAAGGTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5740.p1 GENE.S_Transcript_5740~~S_Transcript_5740.p1 ORF type:complete len:585 (+),score=134.25,NUMOD3|PF07460.7|2.5e-07,NUMOD3|PF07460.7|3.7e+02,NUMOD3|PF07460.7|1.4e+03 S_Transcript_5740:315-2069(+)
MPLLDIAVAQSSFQNYISYPRWRLFINGKGPNYSLLQYEERWTSFQKSLQNPGNLNIHLVHCKKSHPKFLIKAVATLEPKCPVQSKDGKKEGKVLSSTVQSLSSTDRSESEAEDPEEVEDKERLRRLRISKANKGNTPWNKGKKHSPETLQRIRERTRLAMQDPKVKMKLANKGHAQSIETREKIAAGVRMGWQRRREKLLLQETCLFDWQNLIAEAARKGFYNEEELQWDSYKILNDKLQQEWLASIEYRKSIPRTKGSKRAPKSAEQRRKIAEAIAAKWADPEYRSKVCSGLAKYHGTPEGAERKARRKPSGEGRSTRTSKRNVGAEKSSEIEMKLRSQQSKLKKRTAPKYKDPLAKTKLEMLKSIRAQRLTSETKKNEALQRARLLIAEAQKAAKALEVAATKSPVAQASLVESRKLIAEAIESIKSIESGGLTSQDDLASENQNFVGNHEEVLTVTEEDNELPQRGLNGIASVQTSEGHNSDLNLYSLTMLDKMDRNYQPPTSLSGCELPKLELDNFIGNSDSGEFTRQHQPDSNGTIRLNGVSSYNGAKLQFQKEQTSAVKTATKKWVRGRLVEVAEGE*

Click here to download the sequence:
Link to NCBI Protein BLAST