Transcript Information: S_Transcript_57477.p1


Annotated TAIR IDAT2G31600.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13448541-13450083 | Reverse length=301
E-Value2E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.5106604938849
Replicate 21.8732557171475
Replicate 30.78294634317172
Condition 2: 8 Hour
Replicate 11.8106463476811
Replicate 22.8492448739275
Replicate 32.815300627073
Condition 3: 24 Hour
Replicate 10.92737712931768
Replicate 20.42761908634618
Replicate 31.0707471681417


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57477.p1 GENE.S_Transcript_57477~~S_Transcript_57477.p1 ORF type:3prime_partial len:212 (+),score=13.78,zf-C3Hc3H|PF13891.2|9.1e+03,zf-C3Hc3H|PF13891.2|2.4e-16 S_Transcript_57477:191-823(+)
ATGGAAGGACCATCATCATCAGCCCCACCAATCGCCGACTCAGAAGACGACGACACAGCCTTGGCCAACTCGGAGTTCCTAACTCGTCAAGAACTCCTGAAACGGCGATCTCGGAGACTGCGTCGACTCGCCAAGTGTTACCGAGACTATTACTGGACCCTCATGGAAGACCTCAAACGAAAGCACAGAGAGTATTACTGGAAGTTCGGCAAAAGCCCCTTTAGGGACGACGATAATGAGGCCGAAAACGGTGCCGTTCCTGGTTTTGTGAATAACAACAACAACAACAACAACGATACTAATAATCATAGTAATAATTGTAGTCATCAAAAAGAGAATGGTGATATTGCGATTAATAGTAGCGGTAAATTAGATTTAGGGTTTGATGATTACAATCGGTGTGCATTTCCTGGGTGTAGATCGAAGGCTATGGCGTTATCAGCGTATTGTCACTCTCATATTTTGTCTGATACTAAACAGAAACTCTACAAAGAATGCAAATTCGTTCTTAAAAGCACGGGATCTGGGCCTATTCTTTGTTTGAAGCCAATACTAGTATCCAGCATTCCTTCCCTATGCCCTGCCCATCTCCAAAGGGCAGAGAAGATTTTCAAAGGGCTATTGAGAAAGGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57477.p1 GENE.S_Transcript_57477~~S_Transcript_57477.p1 ORF type:3prime_partial len:212 (+),score=13.78,zf-C3Hc3H|PF13891.2|9.1e+03,zf-C3Hc3H|PF13891.2|2.4e-16 S_Transcript_57477:191-823(+)
MEGPSSSAPPIADSEDDDTALANSEFLTRQELLKRRSRRLRRLAKCYRDYYWTLMEDLKRKHREYYWKFGKSPFRDDDNEAENGAVPGFVNNNNNNNNDTNNHSNNCSHQKENGDIAINSSGKLDLGFDDYNRCAFPGCRSKAMALSAYCHSHILSDTKQKLYKECKFVLKSTGSGPILCLKPILVSSIPSLCPAHLQRAEKIFKGLLRKE

Click here to download the sequence:
Link to NCBI Protein BLAST