Transcript Information: S_Transcript_57478.p1


Annotated TAIR IDAT2G31600.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:13448541-13450083 | Reverse length=301
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7797379572513
Replicate 26.040003224871
Replicate 36.7319492928732
Condition 2: 8 Hour
Replicate 16.9733215485682
Replicate 25.3590359859421
Replicate 35.3492241137976
Condition 3: 24 Hour
Replicate 14.3191404620186
Replicate 26.0321931952255
Replicate 33.9319536905314


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57478.p1 GENE.S_Transcript_57478~~S_Transcript_57478.p1 ORF type:complete len:263 (+),score=25.61,zf-C3Hc3H|PF13891.2|1.4e+04,zf-C3Hc3H|PF13891.2|3.1e-16 S_Transcript_57478:192-980(+)
ATGGAAGGACCATCATCATCAGCCCCACCAATCGCCGACTCAGAAGACGACGACACAGCCTTGGCCAACTCGGAGTTCCTAACTCGTCAAGAACTCCTGAAACGGCGATCTCGGAGACTGCGTCGACTCGCCAAGTGTTACCGAGACTATTACTGGACCCTCATGGAAGACCTCAAACGAAAGCACAGAGAGTATTACTGGAAGTTCGGCAAAAGCCCCTTTAGGGACGACGATAATGAGGCCGAAAACGGTGCCGTTCCTGGTTTTGTGAATAACAACAACAACGACAGCAACAACAACAACAACGATACTAAGAATCATAGTAATAATTGTAGTCATCAAAAAGAGAATGGTTATATTGCGACGAATAGTAGCGATAAATTAGGGTTGGGGTTTGATGATTACAATCGGTGTGCATTTCCTGGGTGTAGATCGAAGGCTATGGCGTTATCAGCGTATTGTCACTCTCATATTTTGTCTGATACTAAACAGAAACTCTACAAAGACTGCAAATTCGTTCTTAAAAGCACAGGAGCTGGGCCTATTCTTTGTTCGAAGCCAATACTAGTAACCAGCATTCCTTCCCTGTGCCCTGCCCATCTCCTTAGGGCAGAGAAGATGTTCAAAGGGCTATTGAGAAAAGAAGGTGCTCCTGTTGCTTCATCGAACAAGCTCGCTTCTAAATTCCATCTCGTAATAGCTGAGTACATTAACTTGATTCAAAGTAGAAGAAGAGCTGCTGCTGGTGTAAATATAGATGATATTCCCACCAAAGATAGTGCTACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57478.p1 GENE.S_Transcript_57478~~S_Transcript_57478.p1 ORF type:complete len:263 (+),score=25.61,zf-C3Hc3H|PF13891.2|1.4e+04,zf-C3Hc3H|PF13891.2|3.1e-16 S_Transcript_57478:192-980(+)
MEGPSSSAPPIADSEDDDTALANSEFLTRQELLKRRSRRLRRLAKCYRDYYWTLMEDLKRKHREYYWKFGKSPFRDDDNEAENGAVPGFVNNNNNDSNNNNNDTKNHSNNCSHQKENGYIATNSSDKLGLGFDDYNRCAFPGCRSKAMALSAYCHSHILSDTKQKLYKDCKFVLKSTGAGPILCSKPILVTSIPSLCPAHLLRAEKMFKGLLRKEGAPVASSNKLASKFHLVIAEYINLIQSRRRAAAGVNIDDIPTKDSAT*

Click here to download the sequence:
Link to NCBI Protein BLAST