Transcript Information: S_Transcript_57602.p1


Annotated TAIR IDAT1G79890.1
Annotated Gene NameRAD3-like DNA-binding helicase protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:30048655-30052203 | Forward length=882
E-Value3.2E-270
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4506322509148
Replicate 22.2885227417844
Replicate 33.1385531422659
Condition 2: 8 Hour
Replicate 14.9770765083746
Replicate 24.4961251723275
Replicate 35.7694433549949
Condition 3: 24 Hour
Replicate 12.1597048507719
Replicate 22.3141331107129
Replicate 31.880411738469


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57602.p1 GENE.S_Transcript_57602~~S_Transcript_57602.p1 ORF type:complete len:617 (+),score=110.92,Helicase_C_2|PF13307.2|1.2e-49,DEAD_2|PF06733.11|3.2e-28 S_Transcript_57602:906-2756(+)
ATGCTTAGAAAACAAAAGTTACAGAGAGAATTCATAAGCGAGGTCTCAACACAAGAGGCTTTGGATATTGAAGATCTTGTTTCTCTTGGAAGCCAATTAGGAACTTGTCCTTATTATGGCTCACGAAGAATGGTTCCGAATGCAGATCTTATTGTGCTTCCCTATCAGTCTCTACTATCAAAATCATCTCGTGAATCCCTTGGTCTGAATCTCAAGAATAGTATGATTATAATAGATGAGGCTCACAATCTAGCTGATTCCCTTATTGGAATGTGTGATGCAAAACTTACTTTGTCACAGTTGCAAAATGTGCACCAACACTTGGAGAAGTATTTTGGAAACTTCTGCACCCGCTTGGGGCCTAGAAATAGGAGATATGTGCAAACAATGATGGTTGTGACCCGAGCTTTTCTCGAAGCCATACACCATGGGGCAGTAAAAAGCTACAGTGCTACTGGCAATGCTGTTGAAAAGGCTAGGCAACCAGATGCTCCGACTGAAGTATCGGTGACAATAAATGACTTTCTATTTTCTCTGAATGTTGACAACATCAATTTTGTAAAGTTGATAAATTACGTAAAGCAAAGCAATATCATTCACAAGGTATGTGGATATGGAGATAAGCTTTCCTGCAAGGAAAAACAGAACATTGATGGTTCTATGTGCAAGGATGGAGGAAGTACCTTGTCTGGATTCCATGCACTGTTTGATATGTTGCAAGCATTGACAAACAAAAACGTTGATGGAAGGATAATAGTCTCAACCATGAGATCAACAGGATCTGGTGAACAAGAAGGATTCATCAAATATGTCATGCTAACTGGTGAAAAGATCTTTTCTGAGATTGCAAATGAAGCTCATGCAGTTATCTTGGCGGGAGGAACTCTACAACCTATTGAGGAGACGAGGGAGCGACTCTTCCCTGGGCTACCACTGGACCAGTTGCATTTCTTTTCATGTGGTCACATTGTCCCTCCTGAGAGTATCCTACCAATTGCTGTGTCACAAGGACCATCTGGTCAGTCATTTGATTTTAGCTACTCATGCAGAAGCTCGTCAAAAATGATTGAGGAACTAGGTCTTCTGCTTTGCAATTTGGTGACTGTAGTTCCTGGAGGAATAGTTGTATTCTTCTCTTCATTTGATTATGAGGGCAAGGTCTATGATGTATGGAAGACTTCTGGCATTCTACAGAGGATTACTAGAAAGAAGAGTCTGTTCAGAGAACCTCGGAACAGTGCAGATATTGAAGCTGTGTTAAAAGAGTACGGGGAAGCAATTCATACACTAGCTAGTGGTAGAAGCTTAAAAGGAGAAACATCTCAAAATGGTGCAGTGTTGTTGGCTGTGGTGGGCGGTAAAATATCAGAGGGCATCAACTTCAGTGATGGGATGGGTCGTTGTATAGTTATGGTTGGACTTCCTTACCCAAGCCCGTCAGATATCGAATTGATTGAGAGAGTAAAGCATATGGAAGGCCTGGGTGAGACAAATTCCTCTAATGTCATGCAGCGTCCAATTGGTGATAGATGTAACAGTGGGGATGTTCAAGCTGGGTTTGATGTTCTAAGACGTTGCAAGCGAAGAGGCAAGGAGTATTATGAAAATCTTTGCATGAAAGCTGTAAATCAGTCAATTGGTAGAGCAATTCGCCATATCAATGATTATGCCGCTATCTTATTGGTTGATTCACGGTATGCATCTGCTCCTTCCAAACAAAGCTCTTCACACCCATCAAACAAACTACCACAGTGGATAAGAGATTGTCTTGTTTCTTCAACTGGAAGCTATGGTGAAGTTCTCAGACTGCTGCATCAGTTCTTTAGGCATAACAAGAGTAAAGTAACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57602.p1 GENE.S_Transcript_57602~~S_Transcript_57602.p1 ORF type:complete len:617 (+),score=110.92,Helicase_C_2|PF13307.2|1.2e-49,DEAD_2|PF06733.11|3.2e-28 S_Transcript_57602:906-2756(+)
MLRKQKLQREFISEVSTQEALDIEDLVSLGSQLGTCPYYGSRRMVPNADLIVLPYQSLLSKSSRESLGLNLKNSMIIIDEAHNLADSLIGMCDAKLTLSQLQNVHQHLEKYFGNFCTRLGPRNRRYVQTMMVVTRAFLEAIHHGAVKSYSATGNAVEKARQPDAPTEVSVTINDFLFSLNVDNINFVKLINYVKQSNIIHKVCGYGDKLSCKEKQNIDGSMCKDGGSTLSGFHALFDMLQALTNKNVDGRIIVSTMRSTGSGEQEGFIKYVMLTGEKIFSEIANEAHAVILAGGTLQPIEETRERLFPGLPLDQLHFFSCGHIVPPESILPIAVSQGPSGQSFDFSYSCRSSSKMIEELGLLLCNLVTVVPGGIVVFFSSFDYEGKVYDVWKTSGILQRITRKKSLFREPRNSADIEAVLKEYGEAIHTLASGRSLKGETSQNGAVLLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSDIELIERVKHMEGLGETNSSNVMQRPIGDRCNSGDVQAGFDVLRRCKRRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDSRYASAPSKQSSSHPSNKLPQWIRDCLVSSTGSYGEVLRLLHQFFRHNKSKVT*

Click here to download the sequence:
Link to NCBI Protein BLAST