Transcript Information: S_Transcript_57673.p1


Annotated TAIR IDAT3G20250.1
Annotated Gene Namepumilio 5
Annotated Gene Symbol(s)APUM5, PUM5
Annotation TypeOrtholog
Chromosome Positionchr3:7059098-7062660 | Reverse length=961
E-Value1.7E-203
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.251024912434
Replicate 212.287000688535
Replicate 311.84533455776
Condition 2: 8 Hour
Replicate 120.480176676515
Replicate 216.119553542242
Replicate 318.521391973841
Condition 3: 24 Hour
Replicate 114.541055575548
Replicate 213.335718397058
Replicate 310.714242440385


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57673.p1 GENE.S_Transcript_57673~~S_Transcript_57673.p1 ORF type:complete len:984 (+),score=217.78,PUF|PF00806.15|6.3e-06,PUF|PF00806.15|1.1e-07,PUF|PF00806.15|0.0006,PUF|PF00806.15|3.1e-06,PUF|PF00806.15|1.8e-05,PUF|PF00806.15|7.1e-07,PUF|PF00806.15|7e-06,PUF|PF00806.15|1.8e-09 S_Transcript_57673:311-3262(+)
ATGGCAACTGAGAGTCCTATTAGAATGCTTGAGGCACGGGGAAAGTGGGCCCCACACAAGGGGGCTGCAACTTTCTCTTCACCTGCTAATATGGCTGTGGATGAGGAGGCGTTACTTGTTAAGGGTCACAAGTACCGCGGTGGGAGGGGTCTTGTTCCCAATCGAAGCGGAAGTGCACCCCCGAACATGGAAGGCTCTCTTGCAGCCATAGGAAATCTCATGCAGAACTCCACTCTAAATGCAAATTTGGCAAGTCTACATTATCATGGAGAATTCGGAGGGCCTGAAGGGCAATTGGTTTCTTATTCATCTTCTGTATCAGATTACTCTTCCAATACCGGGTTCAGTCCAAAGTTCCATCACTCTTTTACCCCAGGATTTGATCAAGATTTAGTATCTAATCATGTTGGCAACCAGTTGAGGTTGACCTCTCTTAGTGGGAGCAGTGATAATTTCTTGCATTTGTCTCGAAGTTCTCTTCCAACACACAAGGAGGAGCCTGAGGATGATAGATCGCCACAGAAGTCTTCTGATGATTTGACAGACAGGAGTTCTGCTGTGTGGTCTGCACAGGAATCATCTACATCTATTGGACAATCTAGAAATACTACGAATCTCATAAAGGATGATCCTACGTGTATGTCGTCACCTGCAAATGATCAGCTAAACACCTTATGCCAAGGATCTGGGGTTGACGGGCGTAGCAGTCACGATAATGATAATACTTCCGTTCATGAGGAGTCAAGCAGTGTATCAACAACAGAAGCATTGGTTGTCCGTGTGATTAATACTACATCGCCTTCAAGCATTGATCATTCCGCTGTTTTGAGATCTGTATCTAATGAATCAAGACAAGGTTCGTCGCTGCCCATTCAAAATGCTGATTCAAGCAGTATAGGTTTACGTCCAGGAAACAAGACTTTGGTTAGTGGTGATCCAGACATTGCTAGCGTGCAATCTGGAATCAAGGCTTTAAAATTAGCCTCCTCGCCAAATTCAGAGAAACATGGAGGTCGAGGAGAAAGACAACCCAACTTCCAAACTAATCTTCTGCACCACCAAATGCACCAACAGGGTGGTAACTTCCAGTTTCAGGGTTCCATGCCTCAAATAGTATCTCAGGGTACAAATAATTCATATGTTGTTGCTAATCAATTTTTTCATGGTGGAAAGTTCTCTTCAACAGAAGTTCAACCAGTACTTCACTCTTCAGGTTTTACACCTCCGCTTTATGCTACTGCAGCAGCCAATTATTTGCACTCAGCAAGTCCATATTATGCAGGAGTACAACCACCTGGAGTAGTATATTCTCCACAGTATGGTGTGGGTGGATACCCTTTCAATGCCAGCGTTCTTCCTCCTTTCTTGCCTGGATACCCTCCACATAATGCTGTCCCTTTAGCTTTTGATGGCGTTACTGCTGCTGGTTCTGATGTTAATACCCAAGTTTCTGGGTCATGGGGAAGCAGTCCTCAAGGAGTTGATCTGCAGCATATGAATAAATTCTATGGACAACTTGGATATGCACAACCCTTTGTTGATCCTCGCCTGCAATTTCACCAGCCTTTTGGAGATTTGTACAATGTTCCTGGTCATGTTGATCCTTTGGCGTTGAGAGGAGGTGCTGTTGGGAACCAGGGAGCTGGTGGACAGAGCAATGCAAGTCAGAGAAGGGGGGCAATTCCTGGTACAGATAATGCTGGAAGCTCAGCGAACATGGGCTTCTTCATGCATATTCCGAACTCGTCTCTTGCAAGTCCAGTGTTGCCTGGATCTCCCATTGGCGGGGGCAGTCTTCCTGGAGGAAGAAGTGATGTGAGTTCACCAAATTCTGGTAGACGTGCAAGTATATATGCTGGTTGGCAAGGTCAACGAGAATTTGAAAACTTTAGTTATCAAAAGCCTTACTCCTTCCTTGAGGAGCTAAAGGCTGGTAAAGGCAGAAGATTTGAGCTATCTGATATAGCAGGTCATGTGGTTGAATTCAGTGTTGATCAACATGGGAGTCGATTTATTCAGCAGAAGCTGGAAAATTGTAGCGCTAAAGACAAGGCATCTGTGTTTCAAGAAGTTCTTCCTCATGCATCCAAATTGATGACTGATGTATTTGGAAATTATGTTATTCAAAAGTTTTTTGAGTATGGAAGCTCTGACCAGAGGAGGGACCTAGCCAATGCACTCTCAGGTCAGATCTTACCGCTGAGCCTGCAGATGTATGGTTGTAGAGTCATCCAAAAGGCACTTGATGTTATTGAGCTTGACCATAAGGCTGAGCTTGTTCATGAGCTGGATGGACATGTCATGAGATGTGTTCGTGATCAAAACGGGAATCATGTGATTCAGAAGTGTATTGAATGTGTTCCAACAGAAAAGATTAGTTTTATTATTTCTGCTTTCCGTGGACAAGTTGCTAGCCTTTCCATGCATCCTTATGGTTGTCGTGTTATACAGCGAGTTTTGGAGCACTGTACTGATGCATTGCAAACCCAGTTTATAGTGGATGAAATATTGGATTCTGTTTGTACCCTTGCTCAAGACCAGTATGGCAACTATGTTACCCAGCATGTATTGGAGAGGGGGAAGCCTCAGGAGAGGACCCAAATCATTAAAAATTTGTGTGGGCAAGTTGTACAAATGAGCCAGCATAAGTTTGCATCAAATGTTGTTGAAAAGTGTCTGGAGTATGGTGAGCCTGCTGCAAGAGAACTCTTGATTGCTGAAGTCATTGGGCAAAGCGAGGAAAACGATAACTTATTGGTAATGATGAAAGATCAATATGCTAATTATGTGGTCCAAAAGATTCTTGAGACATGTACAGATAGTCAACGAGATCTGCTGATTGGTCGAATAAAAGTGCATCTTCATGCTTTGAAGAAATATACTTATGGAAAGCATATTGTGGCCCGCTTTGAGCAGTTATTTGGAGAAATTCAAGCACAGGGTTCTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57673.p1 GENE.S_Transcript_57673~~S_Transcript_57673.p1 ORF type:complete len:984 (+),score=217.78,PUF|PF00806.15|6.3e-06,PUF|PF00806.15|1.1e-07,PUF|PF00806.15|0.0006,PUF|PF00806.15|3.1e-06,PUF|PF00806.15|1.8e-05,PUF|PF00806.15|7.1e-07,PUF|PF00806.15|7e-06,PUF|PF00806.15|1.8e-09 S_Transcript_57673:311-3262(+)
MATESPIRMLEARGKWAPHKGAATFSSPANMAVDEEALLVKGHKYRGGRGLVPNRSGSAPPNMEGSLAAIGNLMQNSTLNANLASLHYHGEFGGPEGQLVSYSSSVSDYSSNTGFSPKFHHSFTPGFDQDLVSNHVGNQLRLTSLSGSSDNFLHLSRSSLPTHKEEPEDDRSPQKSSDDLTDRSSAVWSAQESSTSIGQSRNTTNLIKDDPTCMSSPANDQLNTLCQGSGVDGRSSHDNDNTSVHEESSSVSTTEALVVRVINTTSPSSIDHSAVLRSVSNESRQGSSLPIQNADSSSIGLRPGNKTLVSGDPDIASVQSGIKALKLASSPNSEKHGGRGERQPNFQTNLLHHQMHQQGGNFQFQGSMPQIVSQGTNNSYVVANQFFHGGKFSSTEVQPVLHSSGFTPPLYATAAANYLHSASPYYAGVQPPGVVYSPQYGVGGYPFNASVLPPFLPGYPPHNAVPLAFDGVTAAGSDVNTQVSGSWGSSPQGVDLQHMNKFYGQLGYAQPFVDPRLQFHQPFGDLYNVPGHVDPLALRGGAVGNQGAGGQSNASQRRGAIPGTDNAGSSANMGFFMHIPNSSLASPVLPGSPIGGGSLPGGRSDVSSPNSGRRASIYAGWQGQREFENFSYQKPYSFLEELKAGKGRRFELSDIAGHVVEFSVDQHGSRFIQQKLENCSAKDKASVFQEVLPHASKLMTDVFGNYVIQKFFEYGSSDQRRDLANALSGQILPLSLQMYGCRVIQKALDVIELDHKAELVHELDGHVMRCVRDQNGNHVIQKCIECVPTEKISFIISAFRGQVASLSMHPYGCRVIQRVLEHCTDALQTQFIVDEILDSVCTLAQDQYGNYVTQHVLERGKPQERTQIIKNLCGQVVQMSQHKFASNVVEKCLEYGEPAARELLIAEVIGQSEENDNLLVMMKDQYANYVVQKILETCTDSQRDLLIGRIKVHLHALKKYTYGKHIVARFEQLFGEIQAQGSG*

Click here to download the sequence:
Link to NCBI Protein BLAST