Transcript Information: S_Transcript_57675.p1


Annotated TAIR IDAT4G25880.1
Annotated Gene Namepumilio 6
Annotated Gene Symbol(s)APUM6, PUM6
Annotation TypeHomolog
Chromosome Positionchr4:13155518-13159078 | Forward length=861
E-Value5E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.791536493626
Replicate 221.274832787604
Replicate 320.528521712103
Condition 2: 8 Hour
Replicate 127.24910984967
Replicate 227.03265043967
Replicate 324.170648623506
Condition 3: 24 Hour
Replicate 124.272092767327
Replicate 219.223768747795
Replicate 320.693086034753


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57675.p1 GENE.S_Transcript_57675~~S_Transcript_57675.p1 ORF type:complete len:1008 (+),score=219.67,PUF|PF00806.15|6.4e-06,PUF|PF00806.15|1.1e-07,PUF|PF00806.15|0.00061,PUF|PF00806.15|3.1e-06,PUF|PF00806.15|1.8e-05,PUF|PF00806.15|7.4e-07,PUF|PF00806.15|7.2e-06,PUF|PF00806.15|1.9e-09 S_Transcript_57675:311-3334(+)
ATGGCAACTGAGAGTCCTATTAGAATGCTTGAGGCACGGGGAAAGTGGGCCCCACACAAGGGGGCTGCAACTTTCTCTTCACCTGCTAATATGGCTGTGGATGAGGAGGCGTTACTTGTTAAGGGTCACAAGTACCGCGGTGGGAGGGGTCTTGTTCCCAATCGAAGCGGAAGTGCACCCCCGAACATGGAAGGCTCTCTTGCAGCCATAGGAAATCTCATGCAGAACTCCACTCTAAATGCAAATTTGGCAAGTCTACATTATCATGGAGAATTCGGAGGGCCTGAAGGGCAATTGGTTTCTTATTCATCTTCTGTATCAGATTACTCTTCCAATACCGGGTTCAGTCCAAAGTTCCATCACTCTTTTACCCCAGGATTTGATCAAGATTTAGTATCTAATCATGTTGGCAACCAGTTGAGGTTGACCTCTCTTAGTGGGAGCAGTGATAATTTCTTGCATTTGTCTCGAAGTTCTCTTCCAACACACAAGGAGGAGCCTGAGGATGATAGATCGCCACAGAAGTCTTCTGATGATTTGACAGACAGGAGTTCTGCTGTGTGGTCTGCACAGGAATCATCTACATCTATTGGACAATCTAGAAATACTACGAATCTCATAAAGGATGATCCTACGTGTATGTCGTCACCTGCAAATGATCAGCTAAACACCTTATGCCAAGGATCTGGGGTTGACGGGCGTAGCAGTCACGATAATGATAATACTTCCGTTCATGAGGAGTCAACCAGTGTATCAACAATAGAAGCATTGGTTGTCCGTGTGACTAATACTACATCGCCTTCAAGCTTTGATCATTCCGCTGTTTTGAGATCTGTATCTAATGAATCAAGACAAGGTTCGTCGCTGCCCATTCAAAATGCTGATTCAAGCAGTATAGGTTTACGTCCAGGAAACAAGACTTTGGTTAGTGGTGATCCAGACATTGCTAGCGTGCAATCTGGAATCAAGGCTTTAAAATTAGCCTCCTCGCCAAATTCAGAGAAACATGGAGGTCGAGGAGAAAGACAACCCAACTTCCAAACTAATCTTCTGCACCACCAAATGCACCAACAGGGTGGTAACTTCCAGTTTCAGGGTTCCATGCCTCAAATAGTATCTCAGGGTACAAATAATTCATATGTTGTTGCTAATCAATTTTTTCATGGTGGAAAGTTCTCTTCAACAGAAGTTCAACCAGTACTTCACTCTTCAGGTTTTACACCTCCGCTTTATGCTACTGCAGCAGCCAATTATTTGCACTCAGCAAGTCCATATTATGCAGGAGTACAACCACCTGGAGTAGTATATTCTCCACAGTATGGTGTGGGTGGATACCCTTTCAATGCCAGCGTTCTTCCTCCTTTCTTGCCTGGATACCCTCCACATAATGCTGTCCCTTTAGCTTTTGATGGCGTTACTGCTGCTGGTTCTGATGTTAATACCCAAGTTTCTGGGTCATGGGGAAGCAGTCCTCAAGGAGTTGATCTGCAGCATATGAATAAATTCTATGGACAACTTGGATATGCACAACCCTTTGTTGATCCTCGCCTGCAATTTCACCAGCCTTTTGGAGATTTGTACAATGTTCCTGGTCATGTTGATCCTTTGGCGTTGAGAGGAGGTGTTGTTGGGAACCAGGTGAGTAATTTTGATTCACAGGTAGGGCCTGAGTTATCATCTATTGCTCCTGATCACAGACATCAACATCAGGGAGCTGGTGGACAGAGCAATGCTAGTCAGAGAAGGGGGCCAATTCCTGGTACAGATTATGCTGGAAGCTCAGCGAACATGGGCTTCTTCATGCATATTCCGAACTCGTCTCTTGCAAGTCCAGTGTTGCCTGGATCTCCCATTGGCGGGGGCAGTCTTCCTGGAGGAAGAAGTGATGTGAGTTCACCAAATTCTGGTAGACGTGCAAGTATATATGCTGGTTGGCAAGGTCAACGAGAATTTGAAAACTTTAGTTATCAAAAGCCTTACTCCTTCCTTGAGGAGCTAAAGGCTGGTAAAGGCAGAAGATTTGAGCTATCTGATATAGCAGGTCATGTGGTTGAATTCAGTGTTGATCAACATGGGAGTCGATTTATTCAGCAGAAGCTGGAAAATTGTAGCGCTAAAGACAAGGCATCTGTGTTTCAAGAAGTTCTTCCTCATGCATCCAAATTGATGACTGATGTATTTGGAAATTATGTTATTCAAAAGTTTTTTGAGTATGGAAGCTCTGACCAGAGGAGGGACCTAGCCAATGCACTCTCAGGTCAGATCTTACCGCTGAGCCTGCAGATGTATGGTTGTAGAGTCATCCAAAAGGCACTTGATGTTATTGAGCTTGACCATAAGGCTGAGCTTGTTCATGAGCTGGATGGACATGTCATGAGATGTGTTCGTGATCAAAACGGGAATCATGTGATTCAGAAGTGTATTGAATGTGTTCCAACAGAAAAGATTAGTTTTATTATTTCTGCTTTCCGTGGACAAGTTGCTAGCCTTTCCATGCATCCTTATGGTTGTCGTGTTATACAGCGAGTTTTGGAGCACTGTACTGATGCATTGCAAACCCAGTTTATAGTGGATGAAATATTGGATTCTGTTTGTACCCTTGCTCAAGACCAGTATGGCAACTATGTTACCCAGCATGTATTGGAGAGGGGGAAGCCTCAGGAGAGGACCCAAATCATTAAAAATTTGTGTGGGCAAGTTGTACAAATGAGCCAGCATAAGTTTGCATCAAATGTTGTTGAAAAGTGTCTGGAGTATGGTGAGCCTGCTGCAAGAGAACTCTTGATTGCTGAAGTCATTGGGCAAAGCGAGGAAAACGATAACTTATTGGTAATGATGAAAGATCAATATGCTAATTATGTGGTCCAAAAGATTCTTGAGACATGTACAGATAGTCAACGAGATCTGCTGATTGGTCGAATAAAAGTGCATCTTCATGCTTTGAAGAAATATACTTATGGAAAGCATATTGTGGCCCGCTTTGAGCAGTTATTTGGAGAAATTCAAGCACAGGGTTCTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57675.p1 GENE.S_Transcript_57675~~S_Transcript_57675.p1 ORF type:complete len:1008 (+),score=219.67,PUF|PF00806.15|6.4e-06,PUF|PF00806.15|1.1e-07,PUF|PF00806.15|0.00061,PUF|PF00806.15|3.1e-06,PUF|PF00806.15|1.8e-05,PUF|PF00806.15|7.4e-07,PUF|PF00806.15|7.2e-06,PUF|PF00806.15|1.9e-09 S_Transcript_57675:311-3334(+)
MATESPIRMLEARGKWAPHKGAATFSSPANMAVDEEALLVKGHKYRGGRGLVPNRSGSAPPNMEGSLAAIGNLMQNSTLNANLASLHYHGEFGGPEGQLVSYSSSVSDYSSNTGFSPKFHHSFTPGFDQDLVSNHVGNQLRLTSLSGSSDNFLHLSRSSLPTHKEEPEDDRSPQKSSDDLTDRSSAVWSAQESSTSIGQSRNTTNLIKDDPTCMSSPANDQLNTLCQGSGVDGRSSHDNDNTSVHEESTSVSTIEALVVRVTNTTSPSSFDHSAVLRSVSNESRQGSSLPIQNADSSSIGLRPGNKTLVSGDPDIASVQSGIKALKLASSPNSEKHGGRGERQPNFQTNLLHHQMHQQGGNFQFQGSMPQIVSQGTNNSYVVANQFFHGGKFSSTEVQPVLHSSGFTPPLYATAAANYLHSASPYYAGVQPPGVVYSPQYGVGGYPFNASVLPPFLPGYPPHNAVPLAFDGVTAAGSDVNTQVSGSWGSSPQGVDLQHMNKFYGQLGYAQPFVDPRLQFHQPFGDLYNVPGHVDPLALRGGVVGNQVSNFDSQVGPELSSIAPDHRHQHQGAGGQSNASQRRGPIPGTDYAGSSANMGFFMHIPNSSLASPVLPGSPIGGGSLPGGRSDVSSPNSGRRASIYAGWQGQREFENFSYQKPYSFLEELKAGKGRRFELSDIAGHVVEFSVDQHGSRFIQQKLENCSAKDKASVFQEVLPHASKLMTDVFGNYVIQKFFEYGSSDQRRDLANALSGQILPLSLQMYGCRVIQKALDVIELDHKAELVHELDGHVMRCVRDQNGNHVIQKCIECVPTEKISFIISAFRGQVASLSMHPYGCRVIQRVLEHCTDALQTQFIVDEILDSVCTLAQDQYGNYVTQHVLERGKPQERTQIIKNLCGQVVQMSQHKFASNVVEKCLEYGEPAARELLIAEVIGQSEENDNLLVMMKDQYANYVVQKILETCTDSQRDLLIGRIKVHLHALKKYTYGKHIVARFEQLFGEIQAQGSG*

Click here to download the sequence:
Link to NCBI Protein BLAST