Transcript Information: S_Transcript_57705.p1


Annotated TAIR IDAT1G17745.2
Annotated Gene NameD-3-phosphoglycerate dehydrogenase
Annotated Gene Symbol(s)PGDH
Annotation TypeOrtholog
Chromosome Positionchr1:6101157-6104979 | Forward length=651
E-Value1.3e-308
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.189311817274
Replicate 243.262402684767
Replicate 337.780190193166
Condition 2: 8 Hour
Replicate 1137.09656247697
Replicate 2121.97734062724
Replicate 3135.03372629885
Condition 3: 24 Hour
Replicate 135.895348458723
Replicate 245.114817410194
Replicate 337.576504340643


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57705.p1 GENE.S_Transcript_57705~~S_Transcript_57705.p1 ORF type:complete len:639 (+),score=113.86,2-Hacid_dh_C|PF02826.15|2.5e-63,2-Hacid_dh|PF00389.26|1.6e-35,ACT|PF01842.21|7.8e-10 S_Transcript_57705:231-2147(+)
ATGGCTTCAGCTACATCAGCTGCAAATTCCAAATCAATCTTCACATCTTGCTCCAACACCAATTTCATCCAAAACCAAAAGAGATCCAATCTCCACAACAATCTGTCATTTCTGAATAATGCATCCTCATCCACCTTCCCTAAACTCTCCCACACCCTATCATCCCCTCCTGTTCCCAAACCCAGTAGTAATAATTACATAAATGCCACCAGCACGGTGGACATCTCCACTATCGCCGGCCCGGCTTCGAGGGCTGGGATGGGCCGGGACCAGCAGAAGAGAACCCGGCCCGCGATCCTGGTCTCCGAGAAGCTGGGAGAGGCCGGGCTAGAGGTGCTGAGGGAGTTCGGGGACGTGGACTGCCTGTACGACCTGTCCCCGGACGAGCTCCGGTCGAAGATCTCGGGCTACGAGGCCCTGATCGTGCGGAGCGGGACGAAGGTGGACCGGGCCCTATTGGAGGCGGCCCAGGGGAGGCTGAAGGTGGTGGGCCGGGCCGGGGTGGGGATAGACAATGTGGATCTGCAGGCGGCCACTGAGTACGGGTGCTTGGTGGTGAATGCTCCGACAGCGAACACGGTGGCGGCTGCTGAGCATGGGATCGCTCTGCTTACTGCCATGGCTAGGAATGTTGCTCAGGCTGATGCCTCCATGAAAGCTGGGAAATGGCAAAGGAGCAAGTACGTGGGAGTATCACTAGTGGGAAAGACCTTGGGAGTGATGGGATTTGGAAAGGTAGGATCAGAAGTTGCAAGACGTGCAAAAGGGCTTGGAATGCATGTCATTGCCCACGACCCTTATGCCCCAGCTGACAAAGCCCGGGCAGTTGGCGTAGAGTTGGTGTCCTTCGACCAAGCCATCGCCTCAGCCGACTTCCTCACACTTCATATGCCTCTCACTCCTGCAACTAACAAGGTGTTTAACGATGAAACCTTCTCTAAGATGAAGAAAGGCGTTCGTATCATCAATGTTGCTCGAGGTGGTGTCATTGATGAAGATGCCTTAGTCAGGGCTCTTGACTCTGGTGTCGTTGCTCAGGCAGCGCTTGATGTGTTCTCAGAGGAACCCCCTGCCAAGGATAGCAACTTGGTTCAGCACAAGAAAGTCACTGTCACGCCTCATCTTGGAGCCAGCACCAAAGAAGCTCAGGAAGGAGTCGCTATTGAAATAGCAGAGGCTGTTACGGGAGTGTTAAAAGGAGAACTCTCTGCAACTGCAGTCAATGCCCCAATGGTTTCCCCTGAGGTTTTATCAGAATTGGCCCCATATGTCCAGTTAGCAGAGAAGCTAGGCAGGCTAGCAGTGCAGTTGGTGGCTGGAGGAAAGGGGATCAAGACAATCAAGGTCGTATACAAATCAGCAAGAAGTCAAGATGACTTGGACACCAGACTTCTGAGAGCCATGATCACCAAAGGCATCATTGAGCCTATTTCCAACATGTACATCAACCTAGTCAATGCAGACTTCACTGCCAAGCAGAAGGGGCTCCGTATAAGTGAGGAGAAGGTATCAACAGACTCATCCCCTGAGAACCCAATTGACTCAATCGAAGTCTGGATAACCAATGTCGAGTCCAAATTCGAGAGTGCAATCTCCGAGAAAGGGGATATAAGCATTGAAGGTAAAGTCAAGGACGGGATTCCCCGATTGACCTGTGTAGGGTCATTTGGGGTGGATGTCAGCCTTGAAGGGAACATTATGCTGTGCAGGCAAGTGGATCAGCCTGGCATGATCGGGAATGTTGGTAACATTCTCGGTGAGAGTAACGTAAATGTGAGCTTCATGAGTGTTGGAAGGACACGCAGGGGGAAGAAAGCCATAATGGCAATTGGCATGGACGAAGAACCAGACAAGGATGCCCTAAAGAAGATCGGCCAAGTGCCTGCAGTTGAAGAGTTTGTGTTCCTTAAGCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57705.p1 GENE.S_Transcript_57705~~S_Transcript_57705.p1 ORF type:complete len:639 (+),score=113.86,2-Hacid_dh_C|PF02826.15|2.5e-63,2-Hacid_dh|PF00389.26|1.6e-35,ACT|PF01842.21|7.8e-10 S_Transcript_57705:231-2147(+)
MASATSAANSKSIFTSCSNTNFIQNQKRSNLHNNLSFLNNASSSTFPKLSHTLSSPPVPKPSSNNYINATSTVDISTIAGPASRAGMGRDQQKRTRPAILVSEKLGEAGLEVLREFGDVDCLYDLSPDELRSKISGYEALIVRSGTKVDRALLEAAQGRLKVVGRAGVGIDNVDLQAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNVAQADASMKAGKWQRSKYVGVSLVGKTLGVMGFGKVGSEVARRAKGLGMHVIAHDPYAPADKARAVGVELVSFDQAIASADFLTLHMPLTPATNKVFNDETFSKMKKGVRIINVARGGVIDEDALVRALDSGVVAQAALDVFSEEPPAKDSNLVQHKKVTVTPHLGASTKEAQEGVAIEIAEAVTGVLKGELSATAVNAPMVSPEVLSELAPYVQLAEKLGRLAVQLVAGGKGIKTIKVVYKSARSQDDLDTRLLRAMITKGIIEPISNMYINLVNADFTAKQKGLRISEEKVSTDSSPENPIDSIEVWITNVESKFESAISEKGDISIEGKVKDGIPRLTCVGSFGVDVSLEGNIMLCRQVDQPGMIGNVGNILGESNVNVSFMSVGRTRRGKKAIMAIGMDEEPDKDALKKIGQVPAVEEFVFLKL*

Click here to download the sequence:
Link to NCBI Protein BLAST