Transcript Information: S_Transcript_5771.p3


Annotated TAIR IDAT3G20980.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7355963-7357966 | Forward length=405
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0199150337793
Replicate 21.8776842176608
Replicate 30.52319818676881
Condition 2: 8 Hour
Replicate 10.90746341775034
Replicate 21.9039871182746
Replicate 31.3605860173392
Condition 3: 24 Hour
Replicate 11.3943542653571
Replicate 21.9288350277743
Replicate 31.9676772230942


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5771.p3 GENE.S_Transcript_5771~~S_Transcript_5771.p3 ORF type:complete len:141 (+),score=26.83 S_Transcript_5771:3375-3797(+)
ATGCTGGGAAATCTGATGAAGATGACCCCTTCAGCTCACAATGCTCACAAGCCTTGTGGTGAGACTGATGAGGAGATTGACTCACACTTTGCAAGTATTTTATATTGTCATAGTGCATTTAATAATCAAAGGGCTTGGATCATTGACTCAGGTGCCTCTGACCACATGATAGCTACCCTAGAAGACCTGAGCAATGTGATACCAGTGCAAAGGAGATCAAAGATCACCCTCCCAAATGGTGGAAAGGCCACAGTCACTCACATGGGTGACTTTGTCCTCAATGATGGTTTGATTCTAAAAAATGTTCTTTATGTCCCTGAGTTCCAACAAAATCTTATGTCACTGCATAGATTGGCAGTAGATCAGAATTGCAATGTCATATTTGATAAAACCTCTTGCATACTGCAGGATTGCACAACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5771.p3 GENE.S_Transcript_5771~~S_Transcript_5771.p3 ORF type:complete len:141 (+),score=26.83 S_Transcript_5771:3375-3797(+)
MLGNLMKMTPSAHNAHKPCGETDEEIDSHFASILYCHSAFNNQRAWIIDSGASDHMIATLEDLSNVIPVQRRSKITLPNGGKATVTHMGDFVLNDGLILKNVLYVPEFQQNLMSLHRLAVDQNCNVIFDKTSCILQDCTT*

Click here to download the sequence:
Link to NCBI Protein BLAST