Transcript Information: S_Transcript_57719.p1


Annotated TAIR IDAT4G08940.1
Annotated Gene NameUbiquitin carboxyl-terminal hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:5730986-5732173 | Reverse length=395
E-Value7.1E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3226002470361
Replicate 23.6102746548661
Replicate 34.3591921652147
Condition 2: 8 Hour
Replicate 13.683476509323
Replicate 26.10141326538
Replicate 32.3253651932707
Condition 3: 24 Hour
Replicate 13.3760274485464
Replicate 24.9448316166576
Replicate 33.4393696916067


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57719.p1 GENE.S_Transcript_57719~~S_Transcript_57719.p1 ORF type:5prime_partial len:110 (+),score=25.68,PORR|PF11955.4|5.5e-23 S_Transcript_57719:1-330(+)
AGAAATTTTTTGACAGTTAGGGGGGGCCATGGCCACCGCCCGCCCCCCAATGTTCCGCCCCTGTTGAGCTTGACTTTGGAGAAGAGAGCTTCTATTCATCATGTTGTGGAGTTTAAAGAAGAGTTGAGTCTTACTAAGCATACTTATCAGATGCTTTTGAAGCAGCCTCGGACTTTTTATTTGGCTGGTACTGAGATGAATTGGGCTGTTTTCTTAAAGGATGCTTATGATGAGGATGGCGATTTGATTCACAAAGATCCTCAGGTCATTTTCAATGAGAAGTTGTGTAGGTATGCTGAAATGCAGCAACCTGAAGATTTGAGTGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57719.p1 GENE.S_Transcript_57719~~S_Transcript_57719.p1 ORF type:5prime_partial len:110 (+),score=25.68,PORR|PF11955.4|5.5e-23 S_Transcript_57719:1-330(+)
RNFLTVRGGHGHRPPPNVPPLLSLTLEKRASIHHVVEFKEELSLTKHTYQMLLKQPRTFYLAGTEMNWAVFLKDAYDEDGDLIHKDPQVIFNEKLCRYAEMQQPEDLSE*

Click here to download the sequence:
Link to NCBI Protein BLAST