Transcript Information: S_Transcript_57774.p1


Annotated TAIR IDAT1G80420.1
Annotated Gene NameBRCT domain-containing DNA repair protein
Annotated Gene Symbol(s)ATXRCC1
Annotation TypeHomolog
Chromosome Positionchr1:30235444-30237163 | Reverse length=353
E-Value7E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8882631674777
Replicate 22.5071351769903
Replicate 32.69455559663
Condition 2: 8 Hour
Replicate 12.8387694902677
Replicate 23.1959783771038
Replicate 33.1835356812635
Condition 3: 24 Hour
Replicate 12.4114481775331
Replicate 21.7660112916634
Replicate 32.2929131277378


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57774.p1 GENE.S_Transcript_57774~~S_Transcript_57774.p1 ORF type:3prime_partial len:308 (+),score=80.93,BRCT|PF00533.22|5.4e-10,PTCB-BRCT|PF12738.3|8.9e-08 S_Transcript_57774:332-1252(+)
ATGTCTTCTTCAAACACAAGACCTAGTAATGGTGCTGGTAAGAACCCAAAGCGAGGCTTACCCTCTTGGATGAGTGCAAGAGACGACGGTAATGGAGATAAACCAGCTAATGACAGCATCGATGACGAGAATCAAGTGGACGGTTCACAGAAAAAAGCAAGAGGGCAAGCAAATGCACCTAAAGACAAATGTCAGGAATCAGGAAGCGGGAAGAGAACCTCTTCAGGTGGTCCTAGTGCATTGGATTTCTCCAAACTTTTGGATGGAGTAGTTTTTGTGCTCTCTGGCTTTGTGAATCCTGAACGAGGGATATTGCGGTCACAGGCCCTGGAAATGGGGGCAGAATATCATCCGGACTGGAACTCCAATTGCACTCTTTTAGTTTGTGCATTTCCCAACACCCCAAAATTTCGCCAAGTTGAAGCAGACTGTGGAACAATTGTTTCAAAGGACTGGATAACACAGTGCTACACCCAAAAGAAGCTTGTTGATATTGAAACTTATCTTATGCATGTTGGTAAGCCATGGAGGATTGTGCAGGGAACCAAGTGGATGGCTGCAGTTCATGAAACTTCACCAAGTAAATCTTGCAAACAAGAAGTTAAACGAGCACAAGCAGAGTCTAATTCTTCTACTGCCTCAAAGGGATTGACTGGTGATTCATCTATAAGTCTTGAAGAGAAATTCTCTCCTTCCAGGGTGAAGAAATGGGCACTTGATGATTTGAACAGAACCCTCTCATGGCTTGAGAGTCAGGAAGAGAAGCCGGAGCCAGGTGAGATAAAGAATGTAGCTGCTGAAGGCGTCTTGACATGCTTGCAGGATGCCATCGAGTTGCTTGGCAGAAAGCAGGATTTATGGCAATTGACTGAACAGTGGAACACTGTCCCTCGTGTGGTTGAAGAATTGACTGAAACCCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57774.p1 GENE.S_Transcript_57774~~S_Transcript_57774.p1 ORF type:3prime_partial len:308 (+),score=80.93,BRCT|PF00533.22|5.4e-10,PTCB-BRCT|PF12738.3|8.9e-08 S_Transcript_57774:332-1252(+)
MSSSNTRPSNGAGKNPKRGLPSWMSARDDGNGDKPANDSIDDENQVDGSQKKARGQANAPKDKCQESGSGKRTSSGGPSALDFSKLLDGVVFVLSGFVNPERGILRSQALEMGAEYHPDWNSNCTLLVCAFPNTPKFRQVEADCGTIVSKDWITQCYTQKKLVDIETYLMHVGKPWRIVQGTKWMAAVHETSPSKSCKQEVKRAQAESNSSTASKGLTGDSSISLEEKFSPSRVKKWALDDLNRTLSWLESQEEKPEPGEIKNVAAEGVLTCLQDAIELLGRKQDLWQLTEQWNTVPRVVEELTETQ

Click here to download the sequence:
Link to NCBI Protein BLAST