Transcript Information: S_Transcript_57778.p1


Annotated TAIR IDAT1G80420.1
Annotated Gene NameBRCT domain-containing DNA repair protein
Annotated Gene Symbol(s)ATXRCC1
Annotation TypeHomolog
Chromosome Positionchr1:30235444-30237163 | Reverse length=353
E-Value3E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3697868282813
Replicate 21.7844903318578
Replicate 31.6273002426706
Condition 2: 8 Hour
Replicate 13.0315505842983
Replicate 22.1384855317386
Replicate 31.5673417356604
Condition 3: 24 Hour
Replicate 12.2487380063847
Replicate 21.2776168290588
Replicate 30.98909978059279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57778.p1 GENE.S_Transcript_57778~~S_Transcript_57778.p1 ORF type:complete len:408 (+),score=91.10,BRCT|PF00533.22|5.4e-10,PTCB-BRCT|PF12738.3|6e-07 S_Transcript_57778:326-1549(+)
ATGTCTTCTTCAAACACAAGACCTAGTAATGGTGCTGGTAAGAACCCAAAGCGAGGCTTACCCTCTTGGATGAGTGCAAGAGACGACAGTAATGGAGATAAACCAGATAATGACAGCATGGATGACGAGAGTCAAGTGGACGGTTTGCAGAAAAAAACAAGAGGGCAAGCAAATGTACCTAAAGACAAATGTCAGGAATCAGGAAGCGGGAAGAGAACCTCTTCAGGTGGTCCTAGTGCATTGGATTTCTCCAAACTTTTGGATGGAGTAGTTTTTGTGCTCTCTGGCTTTGTGAATCCTGAACGAGGGATATTGCGGTCACAGGCCCTGGAAATGGGGGCAGAATATCATCCGGACTGGAACTCCAATTGCACTCTTTTAGTTTGTGCATTTCCCAACACTCCAAAATTTCTACAAGTTGAAGCGGACTGCGGAACAATTGTTTCAAAGGACTGGATAACACAGTGCTACACCCAAAAGAAGCTTGTTGATATTGAAACTTATCTTATGCATGTTGGTAAGCCATGGAGGAAAAGCAATGTATCTCGTGCAGGGAACCAAGTTCATGAAACTTCACCAAGTAAATCTTGCAAACAAGAAGTTAAACGAGCACAAGCAGAGTCTAATTCTTCTACTGCCTCAAAGGGATTGACTGGTGATTCATCTATAAGTCTTGAAGAGAAATTCTCTCCTTCCAGGGTGAAGAAATGGGCACTTGATGATTTGAACAGAACCCTCTCATGGCTTGAGAGTCAGGAAGAGAAGCCGGAGCCAGGTGAGATAAAGAATGTAGCTGCTGAAGGCGTCTTGACATGCTTGCAGGATGCCATCGAGTTGCTTGGCAGAAAGCAGGCATATCCATGTGTGGATTTACGGCAATTGACTGAACAGTGGAACACAGTCCCTTGTGTGGTTGAAGAATTGACTAAAACCCAGGCCTCTTCAAAATCTTCTCCTGCAGTTTCTGATGAAGATCTTCACAAACTGGCTCTAACATGTAAGACGATCTATGAGGACGAACTGAAGCAAATATCAAAAAGTTCAAGCAAGAGAAATCAAGAGCCAAAGTCTGACAATCGGGACAAAGGCAAAGGCAAACATGCTGCAACTCAAGACATTGCTAGAAATTCAATGGATTACGACAGCGATGAAACAATTGAAATGACCGAAGAGGAAATAAACGATGCCTACTCTAGTATCATATCAAAGATGCCCAACTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57778.p1 GENE.S_Transcript_57778~~S_Transcript_57778.p1 ORF type:complete len:408 (+),score=91.10,BRCT|PF00533.22|5.4e-10,PTCB-BRCT|PF12738.3|6e-07 S_Transcript_57778:326-1549(+)
MSSSNTRPSNGAGKNPKRGLPSWMSARDDSNGDKPDNDSMDDESQVDGLQKKTRGQANVPKDKCQESGSGKRTSSGGPSALDFSKLLDGVVFVLSGFVNPERGILRSQALEMGAEYHPDWNSNCTLLVCAFPNTPKFLQVEADCGTIVSKDWITQCYTQKKLVDIETYLMHVGKPWRKSNVSRAGNQVHETSPSKSCKQEVKRAQAESNSSTASKGLTGDSSISLEEKFSPSRVKKWALDDLNRTLSWLESQEEKPEPGEIKNVAAEGVLTCLQDAIELLGRKQAYPCVDLRQLTEQWNTVPCVVEELTKTQASSKSSPAVSDEDLHKLALTCKTIYEDELKQISKSSSKRNQEPKSDNRDKGKGKHAATQDIARNSMDYDSDETIEMTEEEINDAYSSIISKMPNS*

Click here to download the sequence:
Link to NCBI Protein BLAST