Transcript Information: S_Transcript_57780.p1


Annotated TAIR IDAT1G80420.1
Annotated Gene NameBRCT domain-containing DNA repair protein
Annotated Gene Symbol(s)ATXRCC1
Annotation TypeHomolog
Chromosome Positionchr1:30235444-30237163 | Reverse length=353
E-Value5E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4492228395395
Replicate 22.1844346096549
Replicate 31.6434121262614
Condition 2: 8 Hour
Replicate 12.6392809798432
Replicate 22.325786244724
Replicate 32.4270519550226
Condition 3: 24 Hour
Replicate 12.70357468943
Replicate 22.1317446532208
Replicate 31.4983392715911


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57780.p1 GENE.S_Transcript_57780~~S_Transcript_57780.p1 ORF type:complete len:202 (+),score=44.89,BRCT|PF00533.22|2.4e-10,PTCB-BRCT|PF12738.3|4.3e-08 S_Transcript_57780:332-937(+)
ATGTCTTCTTCAAACACAAGACCTAGTAATGGTGCTGGTAAGAACCCAAAGCGAGGCTTACCCTCTTGGATGAGTGCAAGAGACGATGGCAATGGAGATAAACCAGCTACTGACAGCATGGACGACGAGAGTCAAGTGGATGGTTCACAGAAAAAAGCAAGAGGGCAAGCAAATGCACCTAAAGACAAATGTCAGGAATCAGGAAGCGGGAAGAGAACCTCTTCAGGTGGTCCTAGTGCATTGGATTTCTCCAAACTTTTGGATGGAGTAGTTTTTGTGCTCTCTGGCTTTGTGAATCCTGAACGAGGGATATTGCGGTCACAGGCCCTGGAAATGGGGGCAGAATATCATCCGGACTGGAACTCCAATTGCACTCTTTTAGTTTGTGCATTTCCCAACACCCCAAAATTTCGCCAAGTTGAAGCAGACTGTGGAACAATTGTTTCAAAGGACTGGATAACACAGTGCTACACCCAAAAGAAGCTTGTTGATATTGAAACTTATCTTATGCATGTTGGTAAGCCATGGAGGAAAAGCAATGTATCTTGTGCAGGGAACCAAGGTCTGTTGAAGACCCTTTTTCAATCCTTTGTTTTTCCAATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57780.p1 GENE.S_Transcript_57780~~S_Transcript_57780.p1 ORF type:complete len:202 (+),score=44.89,BRCT|PF00533.22|2.4e-10,PTCB-BRCT|PF12738.3|4.3e-08 S_Transcript_57780:332-937(+)
MSSSNTRPSNGAGKNPKRGLPSWMSARDDGNGDKPATDSMDDESQVDGSQKKARGQANAPKDKCQESGSGKRTSSGGPSALDFSKLLDGVVFVLSGFVNPERGILRSQALEMGAEYHPDWNSNCTLLVCAFPNTPKFRQVEADCGTIVSKDWITQCYTQKKLVDIETYLMHVGKPWRKSNVSCAGNQGLLKTLFQSFVFPI*

Click here to download the sequence:
Link to NCBI Protein BLAST