Transcript Information: S_Transcript_57819.p1


Annotated TAIR IDAT5G35970.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14119060-14123078 | Reverse length=961
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.415083751776
Replicate 255.560420933763
Replicate 349.199900962834
Condition 2: 8 Hour
Replicate 126.874002844788
Replicate 223.727718254255
Replicate 324.968720130809
Condition 3: 24 Hour
Replicate 158.914988807966
Replicate 259.726366557522
Replicate 351.287459156067


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57819.p1 GENE.S_Transcript_57819~~S_Transcript_57819.p1 ORF type:complete len:957 (+),score=214.17,AAA_12|PF13087.2|3.6e-50,AAA_11|PF13086.2|1.8e+03,AAA_11|PF13086.2|8.1e-48,AAA_30|PF13604.2|1.1e-10,AAA_30|PF13604.2|1.6e+03,AAA_19|PF13245.2|2.3e-10,AAA_19|PF13245.2|2.9e+02,AAA_19|PF13245.2|4.7e+02,Viral_helicase1|PF01443.14|2.7,Viral_helicase1|PF01443.14|35,Viral_helicase1|PF01443.14|0.05,DEAD|PF00270.25|1.6e+03,DEAD|PF00270.25|0.00072,DEAD|PF00270.25|57 S_Transcript_57819:189-3059(+)
ATGATGGAAGCTTCTCGTTGCTATGTATGTTCGGGCTGTTCATTGAAGAACAAATTGCCGAGCTTTAGTACTTGGGGTAGCATTAATCCATGGCGAAATGCGTCTTTTTCTTCGATCAACTTATTGAGTCTCAGCATGAGCCGCCGCCATAATTCTCGTAGTGTTACAGTGTGCTATCAATATCAACAGAAATCACCTCCTAGTAGTAGTAGTAGTGATGAGAAGGAGGACAAGAAAAACAATGGTAAGAGGAGGCGTAGTGCTAGTACAAGTAAGAGGAGCTTGAATGTTAGAGGACTGCAAGCCTCCCAGCAAGGCGACCCATTGGGTAGAAGGGATCTAGGGAAGCAGGTCGTGCGATGGATAAGTCAGGGAATGAGGGGAATGGCTTCAGATTTTGCTAAAGTTGAGATACAGGGAGATTTCTTTGAGCTTGAGCAGCGAATTGCTCCCGGTCTCACTTTCCTCATGGAAGCTCAGCCTTATTTGAGCGCAGTCCCAATGCCCCTTGGTCTTGAAGCCATCTGCTTAAAGGCTTGTACTCATTATCCCACCATTTTCGACCATTTCCAGCGTGAGCTCAGGGATGTTCTGCAGGGTTTGCAGGCTAAATCCATGGTTGAGGATTGGCGTGAAACCCAGTCCTGGAAGCTCCTCAAGCGTCTCGCTAACTCAGCTCAGCACAAAACTATAGCTCGAAAAACATCCCAGCCAAAGCCTACTAGCGGTGCTTTAGGGCTTGACATTGATAAGGTGAAGGCAATACAGAGTAACATTGACCAATACACAAAGCATATGGCGAACTTGCTCCGCATAGAAAGGGATGCAGAGTTGGAGTTCACCCAAGAAGAGTTGAATGCAATGCCAATGCCTGTTGAGAATTCTGATTCAACCAGGCCAATTGAATTTTTGGTTACTCATGGGCAGTCCCAGCAAGAACTATGTGATACACTTTGCAACTTGATTGCAGTTAACACTTCAACAGGATTAGGTGGAATGCATTCAGTGGTTTTTAGGGTTGAGGGAAATCATCGATTGCCACCTACCTCCCTTTCTCCAGGGGATATGGTATGTGTGAGAATATGTGATAGTAGAGGCGCAGGTGCCACTTCATGTGTTCAAGGTTTTGTTGACAATCTTGGGGAGGATGGATGCAGTATTAGTGTAACTCTAGAGTCTCGGCATGGTGATGCCACGTTTTCAAAGCTCTTTGGGAAGCTTGTACGGATTGATCGGATTCATGGATTGGCTGACACGTTAACGTATGAGCGTAACTGTGAGGCTCTGATGCTGCTTCAGAAGAATGGTATGCAGAAAAAAAATCCAGCCATTGCTGTAGTAGCTACTTTGTTTGGTGATAAGAGTGATGTTGATTGGCTGGAAGACAATGATGTAGTAGATTTAAATGAAGAAGAAGTTGATGGCCTGCTGGAGAGTAGCAGTTATGATGATTCTCAGCGAAGAGCGATTGCGTTGGGCTTAAATAAGAAACGGCCCATACTAGTGATTCAAGGTCCACCTGGTTCTGGAAAATCAGGGTTGCTTGAAAGACTCATTGTCCTCTCTGTTGAACGTGGTGAAAAAGTGCTTGTCACAGCCCCAACAAATGCTGCCATTGATAACATGGTTGAGAAACTCTCAGATATTGTGATAAACATTGTGCGCATGGGAAATCCAGCTCGCATATCTGCAGCTGTTGCCTCAAAATCATTAGGTGAGATTGTCAATGTTAGAATGGAGAAATTCAGGGTAGAATTAGAAAGGAAAAGGGCTGATCTAAGGAAAGATCTAAGAATGTGTTTAAAAGATGATTCATTAGCTGCTGGCATACGTCAACTACTAAAGCAACTTGCCAAGGAATTAAAAAAGAAGGAGAAAGAGACTGTTAGGGAGATATTGTCAAGTGCTCAAGTTATTCTTGCTACTACCACTGGAGCTGCAGATACACGTATCAGAAGGCTGGGGCCTTTTGATTTGGTTGTCATAGATGAAGCAGGACAAGCAATTGAGCCGTCAAGCTGGATCCCTATACTGCAGGGGAGACGTTGTATTCTTGCAGGTGATCAATTTCAGCTTGCTCCTGTGGTCTTATCCAGGAAAGCACTAGAAGGTGGCCTTGGAATCTCACTTCTGGAAAGAGCAGCAAATTTGCATGAAGGACTTCTCATTGCTAAGTTGACAATACAGTACCGGATGAATGATGTCATTGCCAGCTGGGCTTCCAAGGAAATGTATGATGGGTCATTGAAATCGGCTACAAATGTCTCATCTCATCTTCTCATAGATTCTCCATTTGTGAAGCATACATGGATTACACAATGCCCATTGCTATTGCTTGATACAAGAATGCCATATGGATGTTTGTCTGTTGGTTGTGAAGAGCAAATGGATCCAGCTGGTACTGGTTCCTTCTACAATGAGGGAGAGGCGAATGTAGTTATCCAGCATGTCTTCTCATTGGTTTATGCAGGTGTTAATCCAGAAGCCATTGCCATTCAGTCTCCATATGTTGCTCAGGTACAACTGTTGAGAGAGAGACTTCATGAAATCCCTGAGGCTAGAGGTATTGAAGTGGCAACAATTGATAGTTTTCAAGGACGAGAAGCTGATGCCGTAATTATCTCAATGGTTCGATCAAACACAATGGGTGCTGTTGGCTTCCTTGGGGATAGTAGGCGAATGAATGTTGCCATAACGAGGGCACGCAAGCATGTTGCCATTGTTTGTGATAGCTCAACTATTTGTCATAACACCTTTTTGGCCAGGCTTTTGCGCCATATTCGATATTTCGGGCGGGTGAAGCAAGCTGAGCGTGATAATTTTGGAGGCCCTGGACTCGATTCAAATCCATTATTACCATCAATTCGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57819.p1 GENE.S_Transcript_57819~~S_Transcript_57819.p1 ORF type:complete len:957 (+),score=214.17,AAA_12|PF13087.2|3.6e-50,AAA_11|PF13086.2|1.8e+03,AAA_11|PF13086.2|8.1e-48,AAA_30|PF13604.2|1.1e-10,AAA_30|PF13604.2|1.6e+03,AAA_19|PF13245.2|2.3e-10,AAA_19|PF13245.2|2.9e+02,AAA_19|PF13245.2|4.7e+02,Viral_helicase1|PF01443.14|2.7,Viral_helicase1|PF01443.14|35,Viral_helicase1|PF01443.14|0.05,DEAD|PF00270.25|1.6e+03,DEAD|PF00270.25|0.00072,DEAD|PF00270.25|57 S_Transcript_57819:189-3059(+)
MMEASRCYVCSGCSLKNKLPSFSTWGSINPWRNASFSSINLLSLSMSRRHNSRSVTVCYQYQQKSPPSSSSSDEKEDKKNNGKRRRSASTSKRSLNVRGLQASQQGDPLGRRDLGKQVVRWISQGMRGMASDFAKVEIQGDFFELEQRIAPGLTFLMEAQPYLSAVPMPLGLEAICLKACTHYPTIFDHFQRELRDVLQGLQAKSMVEDWRETQSWKLLKRLANSAQHKTIARKTSQPKPTSGALGLDIDKVKAIQSNIDQYTKHMANLLRIERDAELEFTQEELNAMPMPVENSDSTRPIEFLVTHGQSQQELCDTLCNLIAVNTSTGLGGMHSVVFRVEGNHRLPPTSLSPGDMVCVRICDSRGAGATSCVQGFVDNLGEDGCSISVTLESRHGDATFSKLFGKLVRIDRIHGLADTLTYERNCEALMLLQKNGMQKKNPAIAVVATLFGDKSDVDWLEDNDVVDLNEEEVDGLLESSSYDDSQRRAIALGLNKKRPILVIQGPPGSGKSGLLERLIVLSVERGEKVLVTAPTNAAIDNMVEKLSDIVINIVRMGNPARISAAVASKSLGEIVNVRMEKFRVELERKRADLRKDLRMCLKDDSLAAGIRQLLKQLAKELKKKEKETVREILSSAQVILATTTGAADTRIRRLGPFDLVVIDEAGQAIEPSSWIPILQGRRCILAGDQFQLAPVVLSRKALEGGLGISLLERAANLHEGLLIAKLTIQYRMNDVIASWASKEMYDGSLKSATNVSSHLLIDSPFVKHTWITQCPLLLLDTRMPYGCLSVGCEEQMDPAGTGSFYNEGEANVVIQHVFSLVYAGVNPEAIAIQSPYVAQVQLLRERLHEIPEARGIEVATIDSFQGREADAVIISMVRSNTMGAVGFLGDSRRMNVAITRARKHVAIVCDSSTICHNTFLARLLRHIRYFGRVKQAERDNFGGPGLDSNPLLPSIR*

Click here to download the sequence:
Link to NCBI Protein BLAST