Transcript Information: S_Transcript_57942.p1


Annotated TAIR IDAT3G10230.1
Annotated Gene Namelycopene cyclase
Annotated Gene Symbol(s)LYC
Annotation TypeOrtholog
Chromosome Positionchr3:3164340-3165845 | Reverse length=501
E-Value7.6E-290
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 176.10476835436
Replicate 286.376257141179
Replicate 390.974445187089
Condition 2: 8 Hour
Replicate 170.129346813655
Replicate 271.802138717225
Replicate 374.226330988097
Condition 3: 24 Hour
Replicate 184.012140855131
Replicate 281.473267307067
Replicate 384.439018225823


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57942.p1 GENE.S_Transcript_57942~~S_Transcript_57942.p1 ORF type:complete len:506 (+),score=108.81,Lycopene_cycl|PF05834.8|1.3e-142,Pyr_redox_2|PF07992.10|0.0024,Pyr_redox_2|PF07992.10|0.16,Pyr_redox_2|PF07992.10|1.7e+03 S_Transcript_57942:444-1961(+)
ATGGGAACTTTGCTTAGGCTTCATAACAAGATTGAATTTTGGAGTCCTTTTGTTGGGTTTGCTGACAAAAAGGCTCATTTGAGATATCATAAAGGTCAACAGCATTATATTGGGTATGATTCTGGATTTACCAATAAGAAAAATGGGCCTAAAAAAGGGTGTGTTAAGGCAAGAAGTAGTGCTCTTTTGGAGCTTGTTCCAGAAACTAAGAAGGAAAACCTTGATTTTGAGTTACCATTGTATGACCCTTCAAAGGGCAAGTTGGTGGACCTTGTTGTTGTTGGGGGTGGCCCAGCTGGGCTTGCTGTTGCTCAGCAAGTTTCTGAGGCTGGCCTCACTGTTTGCTCGATCGATCCTTCCCCGAAATTGATTTGGCCTAACAATTATGGTGTTTGGGTGGATGAATTTGAGGCCATGGATTTGCTTGATTGCCTTGATACTACTTGGTCAGGGGCTGTTGTGTATATCGATGATCATTCGAAGAAGGATTTGAACAGGCCATATGGGAGGGTTAATAGGAAGCAATTGAAATCGAAGATGATGCAAAAATGTATCTCCAATGGGGTGAAATTCCATCAAGCAAAAGTTATTAATGTCATTCATGAGGAGTCTAAATCTCTTGTGACGTGCAATGATGGAGTTACCATTCACGCTTCTGTTGCGTTGGATGCAACTGGCTTCTCTAGATGCCTTGTGCAGTATGATAAGCCATATAACCCTGGTTATCAAATTGCTTATGGCATTTTAGCTGAAGTTGAGAGTCACCCTTTTGATGTGGATAAGATGTTGTTTATGGATTGGAGAGATTCCCATTTGGATGATAATGTGGAACTAAAAGAGAGAAATAGCAAGATCCCGACTTTTCTATATGCTATGCCTTTCTCTTCTAACAGAATATTCCTTGAGGAAACTTCGTTGGTTGCTCGGCCTGGAGTACCTATGGAGGAGATTCAGGAAAGGATGGTTGCTCGATTGAAGCACCTTGGTATAAGAGTGATCAGCATTGAAGAAGATGAACGGTGTGTGATCCCTATGGGGGGTCCCCTTCCTGTAATCCCGCAAAGAGTTGTGGGGATTGGCGGGACAGCTGGGATGGTTCATCCTTCTACTGGGTATATGGTGGCACGAACTTTGGCAGCAGCTCCAATTGTGGCCAATTCTATTGTTCAGTACCTTGGATCAGAAAGCAATTGCTTTGGAAGCGAGTTGTCTGCAAGAGTATGGAAGGATTTGTGGCCAATTCAGAGGAGGCGACAGAGAGAATTTTTCTGCTTTGGTATGGATATTCTGCTCAAACTCGAGTTAGAGGGTACAAGAAAGTTTTTCGATGCATTTTTTGACCTAGAACCTCGTTATTGGCATGGGTTCTTGTCTTCTCGGCTTTTTCTTCCGGAGCTTATAGTTTTCGGACTCTCTCTTTTTGGTCATGCCTCTAACTCTTCTAGGTTAGAAATTATGTCAAAAGGCACCCTTCCCCTAATAAATATGATCGGCAACTTAGTTAAGGATAAGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57942.p1 GENE.S_Transcript_57942~~S_Transcript_57942.p1 ORF type:complete len:506 (+),score=108.81,Lycopene_cycl|PF05834.8|1.3e-142,Pyr_redox_2|PF07992.10|0.0024,Pyr_redox_2|PF07992.10|0.16,Pyr_redox_2|PF07992.10|1.7e+03 S_Transcript_57942:444-1961(+)
MGTLLRLHNKIEFWSPFVGFADKKAHLRYHKGQQHYIGYDSGFTNKKNGPKKGCVKARSSALLELVPETKKENLDFELPLYDPSKGKLVDLVVVGGGPAGLAVAQQVSEAGLTVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDHSKKDLNRPYGRVNRKQLKSKMMQKCISNGVKFHQAKVINVIHEESKSLVTCNDGVTIHASVALDATGFSRCLVQYDKPYNPGYQIAYGILAEVESHPFDVDKMLFMDWRDSHLDDNVELKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMEEIQERMVARLKHLGIRVISIEEDERCVIPMGGPLPVIPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQYLGSESNCFGSELSARVWKDLWPIQRRRQREFFCFGMDILLKLELEGTRKFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFGHASNSSRLEIMSKGTLPLINMIGNLVKDKD*

Click here to download the sequence:
Link to NCBI Protein BLAST