Transcript Information: S_Transcript_57949.p2


Annotated TAIR IDAT1G26240.1
Annotated Gene NameProline-rich extensin-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9078140-9079576 | Reverse length=478
E-Value9E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.58240020778638
Condition 3: 24 Hour
Replicate 10
Replicate 20.49538385959229
Replicate 30.13782537926293


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57949.p2 GENE.S_Transcript_57949~~S_Transcript_57949.p2 ORF type:5prime_partial len:183 (+),score=20.45 S_Transcript_57949:2-550(+)
GGAAGTCCTAACAATCAATGGGCCAGCCCTCCAAAGAAACCACAGGTCATCGAGGATTATGGAAGTTCTAACAATCGATGGGGCAGCCCTCCTAAGGAACCACGGGCCATTGGGAATTATGGAAGTCCAAATAATCGATGGAGCAGTCCCCCGAAGAAACCACAGGCCATAGGAAGTCCTAACAATCAATGGGGCAGCCCTCCAAAGAAACCACAGGTCATCAGGGATTATGAGGGAATTATGGAAGTCCTAACAATCGATGGGGCAGCCCTCCTAAGAAACCACAGGACATCCGGAATTATGGAAGTCCAAATAATCGATGGAGCAGTCCCTCGAAGAAACCGCAGGCCATGGGAAGTCCTAACAATCAATGGGGCAGCCCTCCAAAGAAACCACAGGTCATCAGGGATTATGAAAGTCCTAACAATCGATGGGGCAGCCCTTCTAAGAAACCACAGGCCATCTAGAATTATGAAAGTCCTAGCAACAAGTGGGATAGGTCAAAAAGCCCTGGTTATGATTACTACTCCACAAAGCAATCTCCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57949.p2 GENE.S_Transcript_57949~~S_Transcript_57949.p2 ORF type:5prime_partial len:183 (+),score=20.45 S_Transcript_57949:2-550(+)
GSPNNQWASPPKKPQVIEDYGSSNNRWGSPPKEPRAIGNYGSPNNRWSSPPKKPQAIGSPNNQWGSPPKKPQVIRDYEGIMEVLTIDGAALLRNHRTSGIMEVQIIDGAVPRRNRRPWEVLTINGAALQRNHRSSGIMKVLTIDGAALLRNHRPSRIMKVLATSGIGQKALVMITTPQSNLP*

Click here to download the sequence:
Link to NCBI Protein BLAST