Transcript Information: S_Transcript_57953.p2


Annotated TAIR IDAT1G26240.1
Annotated Gene NameProline-rich extensin-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9078140-9079576 | Reverse length=478
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33266251543976
Replicate 20
Replicate 30.15368946736334
Condition 2: 8 Hour
Replicate 10.62199055091638
Replicate 20.18643207199772
Replicate 30
Condition 3: 24 Hour
Replicate 10.63714243514233
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57953.p2 GENE.S_Transcript_57953~~S_Transcript_57953.p2 ORF type:5prime_partial len:240 (+),score=25.26 S_Transcript_57953:2-721(+)
GGAAGTCCTAACAATCAATGGGCCAGCCCTCCAAAGAAACCACAGGTCATCGAGGATTATGGAAGTTCTAACAATCGATGGGGCAGCCCTCCTAAGGAACCACGGGCCATTGGGAATTATGGAAGTCCAAATAATCGATGGAGCAGTCCCCCGAAGAAACCACAGGCCATAGGAAGTCCTAACAATCAATGGGGCAGCCCTCCAAAGAAACCACAGGTCATCAGGGATTATGAGGGAATTATGGAAGTCCTAACAATCGATGGGGCAGCCCTCCTAAGGAACCACGGGCCATTGGGAATTATGGAAGTCCAAATAATCGATGGAGCAGTCCCCCGAAGGAACCACAGGCCATGGGAAGTCCTAACAATCAATGGGGCAGCCCTCCAAAGAAACCACAGGTCATCGGGGATTATGGAAGTCCTAAGAATCGATGGGGCAGCCCTCCTAAGAAACCACAGGACATCCGGAATTATGGAAGTCCAAATAATCGATGGAGCAGTCCCTCGAAGAAACCGCAGGCCATGGGAAGTCCTAACAATCAATGGGGCAGCCCTCCAAAGAAACCACAGGTCATCAGGGATTATGAAAGTCCTAACAATCGATGGGGCAGCCCTTCTAAGAAACCACAGGCCATCTAGAATTATGAAAGTCCTAGCAACAAGTGGGATAGGTCAAAAAGCCCTGGTTATGATTACTACTCCACAAAGCAATCTCCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57953.p2 GENE.S_Transcript_57953~~S_Transcript_57953.p2 ORF type:5prime_partial len:240 (+),score=25.26 S_Transcript_57953:2-721(+)
GSPNNQWASPPKKPQVIEDYGSSNNRWGSPPKEPRAIGNYGSPNNRWSSPPKKPQAIGSPNNQWGSPPKKPQVIRDYEGIMEVLTIDGAALLRNHGPLGIMEVQIIDGAVPRRNHRPWEVLTINGAALQRNHRSSGIMEVLRIDGAALLRNHRTSGIMEVQIIDGAVPRRNRRPWEVLTINGAALQRNHRSSGIMKVLTIDGAALLRNHRPSRIMKVLATSGIGQKALVMITTPQSNLP*

Click here to download the sequence:
Link to NCBI Protein BLAST