Transcript Information: S_Transcript_57997.p1


Annotated TAIR IDAT1G24440.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8662340-8663777 | Forward length=251
E-Value2E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1186787625875
Replicate 25.0779436283169
Replicate 34.7570549421986
Condition 2: 8 Hour
Replicate 15.0774738850317
Replicate 26.8358426399165
Replicate 36.174828869697
Condition 3: 24 Hour
Replicate 12.3405232311351
Replicate 23.7773019293912
Replicate 33.9034116341251


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_57997.p1 GENE.S_Transcript_57997~~S_Transcript_57997.p1 ORF type:complete len:252 (+),score=37.16,zf-C3HC4_3|PF13920.2|1.6e-09,zf-RING_2|PF13639.2|1.2e-07,zf-C3HC4_2|PF13923.2|4.6e-07,zf-RING_5|PF14634.2|1.1e-05,Prok-RING_4|PF14447.2|1.2e-05,zf-C3HC4|PF00097.21|1.2e-05 S_Transcript_57997:437-1192(+)
ATGTGGCAGAAACAGCCCACCAAATCTTCTTATAGAGAATCAATCAAAGCTCTTGAAGCTGATATACAGCATGCCAATAGTTTGGCAGCTTCTCTCCCAAGAGACTACTGTGGGGATTCTGTTCAGATGAGATTGTCTTACAGCCCATTGGCTCCCTTTCTTCTGTATTTGATAGAATGGATGGACTACAGTTGTACAGATGCCCTCCCTAATTTTTTGGGATTGCATCATATTTTAGTATATAAGGTATATGTTGATGGAATGCCAACAATGTCTTCCCAAGAAAAGAAAGCCACTTTAAGGGAATTCTATGCTGTGATATATCCATCCCTTAGGCAGCTAGAAGGTAATCTTATTGAATTCGATGAAAGCAACAAAAGAACAAGAAGCTCAGATATTTTGAGTCGAAAGAGGGTAGACGAAAAAAGGAAGCTCTTCGATAAGGATTTGGAGAGAGATGATGAGTGTGGGATTTGTATGGAACCTGGGATGAAGATGGTATTGCCCACCTGCGGGCATTCTATGTGCAGCCGGTGCTTTCATGACTGGAATACAAGATCGCGGTCCTGCCCATTCTGCCGGGGAAGCCTAAAGAGGGTCAACTCTAAAGATCTTTGGGTTCTTACTAGTAACTATGAAGTTGTTGATTCAATCACTATTGCTAGGGAGAACCTGAGTCGTTTCTACTTGTACATTGAAAGTCTGCCACTTGTGGCACCCGACACCCATTTCTTTGTCTATGATTACATGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_57997.p1 GENE.S_Transcript_57997~~S_Transcript_57997.p1 ORF type:complete len:252 (+),score=37.16,zf-C3HC4_3|PF13920.2|1.6e-09,zf-RING_2|PF13639.2|1.2e-07,zf-C3HC4_2|PF13923.2|4.6e-07,zf-RING_5|PF14634.2|1.1e-05,Prok-RING_4|PF14447.2|1.2e-05,zf-C3HC4|PF00097.21|1.2e-05 S_Transcript_57997:437-1192(+)
MWQKQPTKSSYRESIKALEADIQHANSLAASLPRDYCGDSVQMRLSYSPLAPFLLYLIEWMDYSCTDALPNFLGLHHILVYKVYVDGMPTMSSQEKKATLREFYAVIYPSLRQLEGNLIEFDESNKRTRSSDILSRKRVDEKRKLFDKDLERDDECGICMEPGMKMVLPTCGHSMCSRCFHDWNTRSRSCPFCRGSLKRVNSKDLWVLTSNYEVVDSITIARENLSRFYLYIESLPLVAPDTHFFVYDYMI*

Click here to download the sequence:
Link to NCBI Protein BLAST