Transcript Information: S_Transcript_58043.p1


Annotated TAIR IDAT5G17920.1
Annotated Gene NameCobalamin-independent synthase family protein
Annotated Gene Symbol(s)ATCIMS, ATMETS, ATMS1
Annotation TypeOrtholog
Chromosome Positionchr5:5935771-5939195 | Forward length=765
E-Value1.6E-273
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1583.13979280815
Replicate 2463.87431848004
Replicate 3425.80886383447
Condition 2: 8 Hour
Replicate 1183.92477694172
Replicate 2171.64899485291
Replicate 3201.292475242
Condition 3: 24 Hour
Replicate 1323.21623582809
Replicate 2435.63613637055
Replicate 3414.54367693547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58043.p1 GENE.S_Transcript_58043~~S_Transcript_58043.p1 ORF type:5prime_partial len:397 (+),score=102.35,Meth_synt_2|PF01717.14|2.2e-158,Meth_synt_1|PF08267.8|39,Meth_synt_1|PF08267.8|3e-05 S_Transcript_58043:2-1192(+)
GGACAGAAGGACGAGGCCTTCTTCTCTGCCAATGCTGCTGCTCTATCTTCAAGGAAGTCCTCTCCTAGAGTGACAAATGAATCCGTTCAAAAGGCTGCTGCTGCCTTGAAGGGCTCAGACCACCGCCGTGCAACCAATGTCAGTGCTAGACTTGATGCTCAGCAGAAGAAGCTTAACCTTCCTGTCCTTCCCACCACCACCATCGGGTCTTTCCCACAGACTGTTGAGCTCAGAAGGGTCCGCCGTGAATTCAAGGCCAAGAAGATCTCTGAGGAGGAGTACGTTGCCGCCATCAAGGAAGAAATCAGCAAGGTTGTCAAGCTCCAGGAAGAACTTGACATTGATGTTCTTGTTCATGGAGAGCCTGAGAGAAACGACATGGTTGAGTACTTCGGAGAGCAGTTGTCTGGTTTTGCCTTCACCGTCAATGGTTGGGTGCAATCTTACGGATCTCGTTGTGTGAAGCCCCCAATTATCTATGGTGATGTGAGCCGCCCCAAGGCCATGACCGTTTTCTGGTCATCCATGGCTCAAAGCATGACTGCCCGCCCAATGAAGGGTATGCTTACAGGACCTGTCACCATCCTCAACTGGTCCTTTGTCAGAAATGACCAACCTAGGCATGAGACCTGCTACCAAATTGCTTTGGCCATCAAGGATGAGGTCGAGGATCTCGAGAAGGCTGGTATCAATGTCATCCAGATTGACGAGGCTGCTTTGAGAGAAGGTCTGCCCCTGAGGAAGTCTGAGCACGAATTCTATTTGAAGTGGGCCGTGCACTCCTTCCGTATCACCAATGTTGGTGTCCAAGACACTACCCAGATCCACACTCACATGTGCTACTCCCACTTCAACGACATTATCCACTCAATCATTGACATGGATGCCGATGTCATCACCATTGAGAACTCTCGTTCAGATGAGAAGCTTCTCTCAGTTTTCCGTGAGGGAGTTAAGTATGGTGCTGGAATTGGTCCTGGTGTCTACGACATCCACTCTCCTAGGATCCCACCCACCGAGGAAATTGCTGACCGTATCAGGAAGATGCTTGCAGTTTTGGAGAGCAACATCTTGTGGGTTAACCCTGACTGTGGTCTCAAGACCCGTAAGTACACCGAGGTTAACCCTGCTCTCTCCAACATGGTTGCAGCTGCCAAGCAGCTCCGCCAAGAGCTTGCCAGTGCTAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58043.p1 GENE.S_Transcript_58043~~S_Transcript_58043.p1 ORF type:5prime_partial len:397 (+),score=102.35,Meth_synt_2|PF01717.14|2.2e-158,Meth_synt_1|PF08267.8|39,Meth_synt_1|PF08267.8|3e-05 S_Transcript_58043:2-1192(+)
GQKDEAFFSANAAALSSRKSSPRVTNESVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREFKAKKISEEEYVAAIKEEISKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHEFYLKWAVHSFRITNVGVQDTTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRIRKMLAVLESNILWVNPDCGLKTRKYTEVNPALSNMVAAAKQLRQELASAK*

Click here to download the sequence:
Link to NCBI Protein BLAST