Transcript Information: S_Transcript_58228.p1


Annotated TAIR IDAT1G69260.1
Annotated Gene NameABI five binding protein
Annotated Gene Symbol(s)AFP1
Annotation TypeOrtholog
Chromosome Positionchr1:26039314-26040570 | Forward length=345
E-Value4.3E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3535543489395
Replicate 27.6524089906696
Replicate 38.5983026335705
Condition 2: 8 Hour
Replicate 15.0911967874236
Replicate 25.3410269275023
Replicate 36.577187211447
Condition 3: 24 Hour
Replicate 111.168442685507
Replicate 211.025638064169
Replicate 313.519924703643


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58228.p1 GENE.S_Transcript_58228~~S_Transcript_58228.p1 ORF type:complete len:444 (+),score=103.90,NINJA_B|PF16136.1|2.9e+03,NINJA_B|PF16136.1|4.9e-23,Jas|PF16135.1|5e-14,EAR|PF07897.7|7.6e-13,EAR|PF07897.7|1.5e+03 S_Transcript_58228:530-1861(+)
ATGGACACTTCATCTAAGTTGTATTCAACAAATACTTCAAAACCAATGGGAGAAGCTGTGGGAACAACTACTGGTACTAGTTTTAGTAGTAGTAGTCATAGGAGAAGTAGAGAAATGGAGAGTCTATCACTTGAAATCAGCAAGTATCCTAGAGATCTCTTACAAAGATTCTTAGGGACAACAAATCCATCATCTTCATCATCAACAACAACAATAGCAAGAACAAGAACAGCAACATTAGATGATTTTAAGTTAGGATGTGGTGGTGGTGACGTGGATGAAGATGATGGGGGTTTAAATCTTGGGCTTGGGTTATCTTTAGGGGGTAAGTTTGGGGTAGATAAGACTCATAAAGGGTTAATAAGGTCATCCTCGATCGTAGGGACTATGCCCTTGATTAGGGAGGATGACAAGGTGGCACCACCGCCTCCAGCGGCGGTGCACACCTTAGTTAGGACTTCGTCGTTGCCGGTCGAGACTGAGGAGGAGTGGAGGAAGAGGAAGGAGATGCAGACATTGAGAAGGATGGAGGCCAAAAGGCGCCGCTCCGAGAAGCAAAGGATTTTGAGGGAAAGTGGTGGTTCTGGTGGTGGTGAGGATAAAGGGGTTGAGAATTTGAACTTTAGGGGGAGGTTGGAAAGAGAACAGCAATGTTTGGGGATAAGCAGCAAGGTTCCTGGTGGTGGTGATTCAGGTTCATCTGTGGGAGGAAACCCTTGTGGTTCATCAGCCCTTCCTCCTAATGTGGAGGTCAAAAGAAGAACTACTTTTGGTAGTTTGCAAGGTTTTTTAATGGCTCAAGCTCAGTCTCAAGCTCAGGCTCAGCATGGTAGTTCTCAGGCTTCAGGAGAATCACAAGGAGGTAGCTCCTCAGGTGCCTCTGAGCTAGACAGTAGAACACATCATGTTCTGTCTTTAGGCGCCAGCAGTTGTGGCGAAGCAGCAAGAAGCCCTGCTAGTATTCACTCGTTACAAGAACGGGGCAGGCAGGATTCAGGGGGTAAAGGTGAAAGCACTCAAGCAGCCTGTGCACCCGAGACAGACAGTTCATCAAAGCCTCCCGATGCTGATGTCAACACAAAGAAGCGAGAGACAGGCACAGGCAGGGTTGAGGATATGCCATGTGTGTTCACTATAGGGGACGGCCCTCACGGGAGAAAGGTGGAAGGTATTCTATACAGGTACGGTAAAGGAGAGGACGTTCGAATTATGTGTGTCTGCCATGGTAGTTTCTTCTCTCCTGGAGAGTTTGTGAAGCATGCAGGAGGTAGAGACGTAGAGCACCCTCTTAGACACATTGTTGTTAGCCCGTCGTCTTCGCCTTTCCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58228.p1 GENE.S_Transcript_58228~~S_Transcript_58228.p1 ORF type:complete len:444 (+),score=103.90,NINJA_B|PF16136.1|2.9e+03,NINJA_B|PF16136.1|4.9e-23,Jas|PF16135.1|5e-14,EAR|PF07897.7|7.6e-13,EAR|PF07897.7|1.5e+03 S_Transcript_58228:530-1861(+)
MDTSSKLYSTNTSKPMGEAVGTTTGTSFSSSSHRRSREMESLSLEISKYPRDLLQRFLGTTNPSSSSSTTTIARTRTATLDDFKLGCGGGDVDEDDGGLNLGLGLSLGGKFGVDKTHKGLIRSSSIVGTMPLIREDDKVAPPPPAAVHTLVRTSSLPVETEEEWRKRKEMQTLRRMEAKRRRSEKQRILRESGGSGGGEDKGVENLNFRGRLEREQQCLGISSKVPGGGDSGSSVGGNPCGSSALPPNVEVKRRTTFGSLQGFLMAQAQSQAQAQHGSSQASGESQGGSSSGASELDSRTHHVLSLGASSCGEAARSPASIHSLQERGRQDSGGKGESTQAACAPETDSSSKPPDADVNTKKRETGTGRVEDMPCVFTIGDGPHGRKVEGILYRYGKGEDVRIMCVCHGSFFSPGEFVKHAGGRDVEHPLRHIVVSPSSSPFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST