Transcript Information: S_Transcript_58263.p1


Annotated TAIR IDAT1G43190.1
Annotated Gene Namepolypyrimidine tract-binding protein 3
Annotated Gene Symbol(s)PTB3
Annotation TypeOrtholog
Chromosome Positionchr1:16275432-16278185 | Reverse length=432
E-Value4.8E-246
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.487412100205
Replicate 235.072909857126
Replicate 334.445738021613
Condition 2: 8 Hour
Replicate 136.865192678272
Replicate 237.470338416762
Replicate 337.470010139698
Condition 3: 24 Hour
Replicate 136.881608225151
Replicate 233.843270201452
Replicate 331.159969657442


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58263.p1 GENE.S_Transcript_58263~~S_Transcript_58263.p1 ORF type:complete len:446 (+),score=75.21,RRM_5|PF13893.2|9.5e-05,RRM_5|PF13893.2|1.8e+02,RRM_5|PF13893.2|1e-10,RRM_5|PF13893.2|1.2e-12,RRM_5|PF13893.2|0.00054,RRM_6|PF14259.2|7.5e-06,RRM_6|PF14259.2|0.0012,RRM_6|PF14259.2|1.6e-08,RRM_6|PF14259.2|7.5e-08,RRM_1|PF00076.18|8.6e-05,RRM_1|PF00076.18|7.3e-06,RRM_1|PF00076.18|3.6e-07,RRM_1|PF00076.18|1.9e-07,RRM_occluded|PF16842.1|0.35,RRM_occluded|PF16842.1|0.97,RRM_occluded|PF16842.1|2.3,RRM_occluded|PF16842.1|0.051 S_Transcript_58263:312-1649(+)
ATGACAGAACCCTCCAAGGTTATTCATGTTCGCAATGTCGGCCATGAAATCACTGAGAATGACTTGCTTCAATTGGTTCAACCTTTTGGGTCCGTTACCAAGCTAGTGATGTTGCGCACCAAAAACCAGGCGCTTCTGCAGATGCAGGACGTGGCATCGGCTATCAATTTGGTAGATTATTATACAAATGTCCAGCCCAGTGTGAAGGGACGAAATGTTTACATGCAGTTCTCATCTCATCAAGAACTTACAACAGATCAGACTCAAACGCGCAAAAGCGATACAGATGGACAGCCAAATCGTATCCTTTTAGTCAGTATACATCATGTCATTTATCCTATGACAGTTGATGTTCTTCATCAAGTATTTTCTCCATACGGGTTTGTGGATAAAATTGTAACGTTCCAGAAGTCAGCTGGTTTTCAAGCCCTCGTTCAGTTTCAAACACGCCAGAGTGCTTCTTCTGCAATGAGTGCACTTCATGGCCGGAATATATATGATGGTTGTTGTCAGCTAGATATACAGTACTCTAATCTTACAGAGTTGCAAGTGAACTACAACAATGATAGATCCAGAGATTTTACAAACCCTAATCTCCCTACAGAACAGAGAGGCAGAAGTTCACAACCTGGTTATGGGGATGGAGGGGGAATGTATGGAATACAAGGTGCTGGGCCTGGTGCAGGCGGATATTCACAGATGGGAAATTCTGCAGCTATGGCAGCTTTTGCTGGTGGTCTTCCTCCAGGTGTTAGTGGGACCAATGACAGATGCACTGTTATAGTATCTAATCTGAACCCTGATAAAATAGATGAAGACAAGCTATTTAATTTATTCTCTCTATATGGAAACATTGTAAGGATCAAGCTTCTCCGAAGTAAACCTGATCATGCACTAGTCGAAATGTCAGATGGTTTCCAGGCTGAGTTGGCTGTGCATTTCTTGAAGGGGGCCATGTTGTTTGGGAAGCGGCTAGAAGTGAACTTCTCCAAGTATCCAAACATAACACCATCACCAGACACCCATGATTACCAGAATTCGAATCTCAACCGTTTTAACAGGAATGCCGCAAAGCATTATCGTTATTGTTGCTCTCCTACGAAAATGATTCACCTATCAAGTATCCCTGAGGACATAAGCGAGGAAGAGATCGTAGACCTCATGGAGGAACATGGGATGGTATGCAGCACCAAGCTTTTTGAGGCAAATGGTAAAAAGCAAGCCTTGGTTTTGTTTGAGACTGAAGAACAGGCAACTGAAGCCCTTGTTTGCAAGCATGCTACTTCAGTCTCTGGATCAGTCATCCGAATCTCCTTCTCCCAATCGCAAAACACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58263.p1 GENE.S_Transcript_58263~~S_Transcript_58263.p1 ORF type:complete len:446 (+),score=75.21,RRM_5|PF13893.2|9.5e-05,RRM_5|PF13893.2|1.8e+02,RRM_5|PF13893.2|1e-10,RRM_5|PF13893.2|1.2e-12,RRM_5|PF13893.2|0.00054,RRM_6|PF14259.2|7.5e-06,RRM_6|PF14259.2|0.0012,RRM_6|PF14259.2|1.6e-08,RRM_6|PF14259.2|7.5e-08,RRM_1|PF00076.18|8.6e-05,RRM_1|PF00076.18|7.3e-06,RRM_1|PF00076.18|3.6e-07,RRM_1|PF00076.18|1.9e-07,RRM_occluded|PF16842.1|0.35,RRM_occluded|PF16842.1|0.97,RRM_occluded|PF16842.1|2.3,RRM_occluded|PF16842.1|0.051 S_Transcript_58263:312-1649(+)
MTEPSKVIHVRNVGHEITENDLLQLVQPFGSVTKLVMLRTKNQALLQMQDVASAINLVDYYTNVQPSVKGRNVYMQFSSHQELTTDQTQTRKSDTDGQPNRILLVSIHHVIYPMTVDVLHQVFSPYGFVDKIVTFQKSAGFQALVQFQTRQSASSAMSALHGRNIYDGCCQLDIQYSNLTELQVNYNNDRSRDFTNPNLPTEQRGRSSQPGYGDGGGMYGIQGAGPGAGGYSQMGNSAAMAAFAGGLPPGVSGTNDRCTVIVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRSKPDHALVEMSDGFQAELAVHFLKGAMLFGKRLEVNFSKYPNITPSPDTHDYQNSNLNRFNRNAAKHYRYCCSPTKMIHLSSIPEDISEEEIVDLMEEHGMVCSTKLFEANGKKQALVLFETEEQATEALVCKHATSVSGSVIRISFSQSQNT*

Click here to download the sequence:
Link to NCBI Protein BLAST