Transcript Information: S_Transcript_58378.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34339356432491
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.14433450735307
Replicate 30.13752159745149
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58378.p2 GENE.S_Transcript_58378~~S_Transcript_58378.p2 ORF type:complete len:155 (-),score=19.96,RVT_1|PF00078.23|1.5e-07 S_Transcript_58378:1218-1682(-)
ATGGAGTACTTGAGCAGGTTGATGCATATGCTTAAAGGAAATCTTGATTTTCACTATCACCCTAGATGCAAAAAATTAAATATCACCCATCTTTGTTTTGCTAATGACTTATTGCTAGTATGTAGAGGTGATATAACTTCTGTGCAGCTATTAGTAGCTCAACTGAGGAAGTTTTCAGAGGCTACAAGTCTGAATGCAAATATGAGTAAAAGTCAAATCTTCTTTGGTGGAGTTGCAAGTCAGGTTAAGGATGATATTCTGAGAGAATCTTGGTTTGAGGAAGGTGCCTTGCCTGTGAGGTACTTAGGTGTCCCTCTTGCATCCAAGAGACTAACAATTCAACAATGTAAAGTGCTAGTGGATAAAATAACTGCTAAAATCAGATCATGGGCTGCAAAATTCCTCAGCTATGGGGGAAGAGTAATTCTTATTAAGGTTGTCATGTTTGGTATACAATCTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58378.p2 GENE.S_Transcript_58378~~S_Transcript_58378.p2 ORF type:complete len:155 (-),score=19.96,RVT_1|PF00078.23|1.5e-07 S_Transcript_58378:1218-1682(-)
MEYLSRLMHMLKGNLDFHYHPRCKKLNITHLCFANDLLLVCRGDITSVQLLVAQLRKFSEATSLNANMSKSQIFFGGVASQVKDDILRESWFEEGALPVRYLGVPLASKRLTIQQCKVLVDKITAKIRSWAAKFLSYGGRVILIKVVMFGIQSF*

Click here to download the sequence:
Link to NCBI Protein BLAST