Transcript Information: S_Transcript_5842.p1


Annotated TAIR IDAT2G02650.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:735411-736546 | Forward length=365
E-Value2E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6389170212092
Replicate 211.37186992625
Replicate 39.2213680418003
Condition 2: 8 Hour
Replicate 15.7262622147857
Replicate 27.18108721769
Replicate 34.802644676431
Condition 3: 24 Hour
Replicate 18.6300774283829
Replicate 29.583154894937
Replicate 38.2516565029084


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5842.p1 GENE.S_Transcript_5842~~S_Transcript_5842.p1 ORF type:complete len:324 (+),score=42.24,RVT_3|PF13456.2|3.4e-16,zf-RVT|PF13966.2|5.3e-15 S_Transcript_5842:1392-2363(+)
ATGGAGCACAGAATTTGGAAGCAGCATATGTGTGTCCCGCCGAAGCTGAAGCTCTTTATCTGGAGGGCATGTACTGAGTGTCTGGCTACACAAGCGAACCTGGCTCGGAGACATATTGTGGACAGTGGGCTCTGTACAATCTGTAATATGAATGAGGAAACTATAAATCACGCTATTTTTTATTGCACTTCTGCCCAATACTTATGGTCTATGAACGATTTCCTCAAGTGCCTCCTCGATGCCCCTGTTGACTCCTTCTTTGCTCGTATTAAATGGATGGGGAAGCGCCTCAAAGGAGCTGATTTTGCCAACTTCCTTGCTGTGACATGGTCTGCATGGTACTGTCGCAATAAAAGTATCTTCGAGGACACACGGCCTGATGCAAGCGTGGTCAAATCAGGCTTTATCAAGCTGGTTCATGATTATGCCAATTATCAACAAGCCACAAACAAAGGTGTGAGCAAAGGGCCTGGAGTTGTATCTCTAACCGACTGGATCCCGCCTGAAAATGGTTTTGTCAAAGTAAATTGTGATGCGGCACGACTAGAAGAAGGTATTTTTGGACTGGGGTGTGTCATTAGAGATGGGAGTGGCAGGATTCTAGCGCTAGGAGTGAAGAAAGTTGTTGCACATTGGAGCACTGTTATGGCAGAGGCTGCTGGTTTACTTTTTGGTATACAAGTGGCAAAGAGTATGAACATACCACTCATTCAAGCAGAAACTAATGCCCTCACCGTCATTCTCAAGGTCTCTAACCCAAAACAGGACCTATCCCCCTTTGGCCAGATCGTAGAGGATATCTTAGATCTTAAACAATGTTTTACATCTTGCTTATTTAGTCATGTTAAGAGAGTGGGCAACATAGTGGCACATCTAATGGCCCGTCACCCACCTCCAAACAACAAGGAACTTGTAATGTTTGAGAACTTCCCACAGAGTATTATGGCTCTTGCTGGATTAGACTTTGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5842.p1 GENE.S_Transcript_5842~~S_Transcript_5842.p1 ORF type:complete len:324 (+),score=42.24,RVT_3|PF13456.2|3.4e-16,zf-RVT|PF13966.2|5.3e-15 S_Transcript_5842:1392-2363(+)
MEHRIWKQHMCVPPKLKLFIWRACTECLATQANLARRHIVDSGLCTICNMNEETINHAIFYCTSAQYLWSMNDFLKCLLDAPVDSFFARIKWMGKRLKGADFANFLAVTWSAWYCRNKSIFEDTRPDASVVKSGFIKLVHDYANYQQATNKGVSKGPGVVSLTDWIPPENGFVKVNCDAARLEEGIFGLGCVIRDGSGRILALGVKKVVAHWSTVMAEAAGLLFGIQVAKSMNIPLIQAETNALTVILKVSNPKQDLSPFGQIVEDILDLKQCFTSCLFSHVKRVGNIVAHLMARHPPPNNKELVMFENFPQSIMALAGLDFG*

Click here to download the sequence:
Link to NCBI Protein BLAST