Transcript Information: S_Transcript_58444.p1


Annotated TAIR IDAT2G41500.1
Annotated Gene NameWD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related
Annotated Gene Symbol(s)LIS, EMB2776
Annotation TypeOrtholog
Chromosome Positionchr2:17304319-17306855 | Reverse length=554
E-Value1.6E-257
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6514211936148
Replicate 29.8299557434472
Replicate 39.251801599694
Condition 2: 8 Hour
Replicate 112.281454159537
Replicate 211.222841561843
Replicate 310.833797132565
Condition 3: 24 Hour
Replicate 19.4805352442678
Replicate 29.9107426860265
Replicate 39.1981383061562


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58444.p1 GENE.S_Transcript_58444~~S_Transcript_58444.p1 ORF type:complete len:606 (+),score=152.30,WD40|PF00400.28|2.1e+02,WD40|PF00400.28|0.015,WD40|PF00400.28|0.019,WD40|PF00400.28|0.0098,WD40|PF00400.28|1.5e-06,WD40|PF00400.28|0.63,WD40|PF00400.28|7.5e-06,PRP4|PF08799.7|1.4e-12 S_Transcript_58444:210-2027(+)
ATGGAGGTAGATGAAGAAAACCATGCTTCTTCATTGGTTGCAGAACCGTCTTCTGTGGTGTCTGATACTGAGATGCTCACTACACCAGCTGCTGCTGCAGTCACCAATCCCGAGGCTCCATCACTGGCTACTGCTCCCGTGCCTCCAGTTGTGCCTGTCGTAATTCCTCCTCCTGTAGTCGTACCCTCGGCTGTGCCCCAGTCAGTTACTCCAGCAGTTGTGCCATTAGCAGCATCTGTACCCCCTCCTGGAGTTCCTCCGATCGCTGCTATACCCGTTATACCTCCTACAGTTCCTAGACCATTGGCACCCCTACCTGTTCGCCCCCCTGTGCTTAAACCACCTGTTGTACAAAATGGGGAGGTGAAAGCGAGTGATTCAGAGTCTGACCATGATGATGATGCACGGACTTCATCTGTGGATTATGAGATTACAGAGGAAAGTAGACAGGTTAGGGAGCGGCAGGAAAAAGCAATGCGGGAGTTGATGATGAAGCGACGTGCTGCTGCTCTTGCCGTACCCACTAACGACATGGCTGTGCGGGCTCGTCTACGTCGACTTGGTGAGCCTATAACTCTTTTTGGAGAGAGAGAGATGGAAAGACGGGATAGGCTCCGGATGCTTATGGCAAAGCTTGATGATGAGGGGCAGTTGGAGAAATTGATGAAAGCCCATGAGGAAGAAGAGGAGGCAGCTTCCGCTAAGGAGGATGTCGAAGAAGAAACAATCCAATATCCATTTTACACTGAAGGCTCAAAAGAATCGTTAGAGGCTCGGACTTTTATGGCTAAGTACTCTATCCCCCGAGCTTCTCAACGTCTGCAGCGTGCGAGGAGGAAAAGGGAAGATCCAGATGAAGATGAGGATGCGGAACTTGATTGGGCTTTGAGACAGGCTGAGACTTTAGTTCTCGATTGCAGTGAAATTGGTGACGAACGCCCACTTTCGGGATGTTCATTCTCAAATGACGGGAAGTTGCTTGCTACCTGTTCCTTGAGTGGAGTCGGCAAGGTGTGGAGTATGCCTCAGGTGAATAAGGTCGCTGCCTTGAAGGGACATACTGAGCATGCTACTGACATTGCATTTTCTCCTGTTAGTGATAATATAGCAACTGCCTCGTTTGACCGCACTGCAAGGTTGTGGAACACGCAGGGCACTGTAGTGAAAACTTTTGAAGGTCATCTTGGCCGTCTTGCTCGTATTGCTTTCCATCCCTCTGGGAAGTACTTGGGCACTACCAGCTTTGACAAGACTTGGCGCCTATGGGATATTGAAAGTGGTTCAGAGCTGCTTCTTCAAGAAGGCCATAGCAGGAGTGTATATGGGCTATCTTTTCATCCAGATGGCTCATTGGCAGCTTCTTGTGGGCTGGATGCCCTTGCACGTGTCTGGGACCTTCGAACAGGAAGAAGTGTCCTTGCTTTGGAAGGTCATGTTAAACCTGTTTTTGGGATTAGTTTTTCTCCTAATGGCTATCATTTGGCCACCGGTTCTGAGGATAACACTTGTCGAATTTGGGACTTAAGAAAGAAACAGTCCTTGTACATCATACCAGCCCATTCAAACCTTATTTCACAGGTCAAGTTTGAGCCTCAAGAGGGATATTATCTAGTAACTGCCTCATATGACATGACTGCAAAGGTATGGTCATCTCGAGATTTCAGACTTGTCAAGACTCTCTCAGGCCATGAAGCAAGAGTTACATCAATAGATGTAACCAGAGATGGACAGTATATTGCAACTGTTGCACATGACCGCACTATCAAGTTGTGGTCGAGCAGTAGCCCTCCTGAAGATGGGTCAATGGACATAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58444.p1 GENE.S_Transcript_58444~~S_Transcript_58444.p1 ORF type:complete len:606 (+),score=152.30,WD40|PF00400.28|2.1e+02,WD40|PF00400.28|0.015,WD40|PF00400.28|0.019,WD40|PF00400.28|0.0098,WD40|PF00400.28|1.5e-06,WD40|PF00400.28|0.63,WD40|PF00400.28|7.5e-06,PRP4|PF08799.7|1.4e-12 S_Transcript_58444:210-2027(+)
MEVDEENHASSLVAEPSSVVSDTEMLTTPAAAAVTNPEAPSLATAPVPPVVPVVIPPPVVVPSAVPQSVTPAVVPLAASVPPPGVPPIAAIPVIPPTVPRPLAPLPVRPPVLKPPVVQNGEVKASDSESDHDDDARTSSVDYEITEESRQVRERQEKAMRELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMLMAKLDDEGQLEKLMKAHEEEEEAASAKEDVEEETIQYPFYTEGSKESLEARTFMAKYSIPRASQRLQRARRKREDPDEDEDAELDWALRQAETLVLDCSEIGDERPLSGCSFSNDGKLLATCSLSGVGKVWSMPQVNKVAALKGHTEHATDIAFSPVSDNIATASFDRTARLWNTQGTVVKTFEGHLGRLARIAFHPSGKYLGTTSFDKTWRLWDIESGSELLLQEGHSRSVYGLSFHPDGSLAASCGLDALARVWDLRTGRSVLALEGHVKPVFGISFSPNGYHLATGSEDNTCRIWDLRKKQSLYIIPAHSNLISQVKFEPQEGYYLVTASYDMTAKVWSSRDFRLVKTLSGHEARVTSIDVTRDGQYIATVAHDRTIKLWSSSSPPEDGSMDID*

Click here to download the sequence:
Link to NCBI Protein BLAST