Transcript Information: S_Transcript_58479.p1


Annotated TAIR IDAT1G43190.1
Annotated Gene Namepolypyrimidine tract-binding protein 3
Annotated Gene Symbol(s)PTB3
Annotation TypeOrtholog
Chromosome Positionchr1:16275432-16278185 | Reverse length=432
E-Value3.8E-260
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.749286681177
Replicate 229.450105611604
Replicate 326.192829673788
Condition 2: 8 Hour
Replicate 134.216468958276
Replicate 235.895505457898
Replicate 336.356692881305
Condition 3: 24 Hour
Replicate 127.931997092468
Replicate 222.816601317311
Replicate 323.465003109479


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58479.p1 GENE.S_Transcript_58479~~S_Transcript_58479.p1 ORF type:complete len:445 (+),score=82.31,RRM_5|PF13893.2|2.4e-07,RRM_5|PF13893.2|4.2e-09,RRM_5|PF13893.2|48,RRM_5|PF13893.2|3.5e-10,RRM_5|PF13893.2|3.8e-06,RRM_6|PF14259.2|1.1e-07,RRM_6|PF14259.2|2.5e+03,RRM_6|PF14259.2|0.04,RRM_6|PF14259.2|9e-07,RRM_6|PF14259.2|1.8e-08,RRM_1|PF00076.18|1e-06,RRM_1|PF00076.18|0.0068,RRM_1|PF00076.18|7.1e-06,RRM_1|PF00076.18|3.2e-09,RRM_occluded|PF16842.1|0.053,RRM_occluded|PF16842.1|38,RRM_occluded|PF16842.1|25,RRM_occluded|PF16842.1|0.0051 S_Transcript_58479:260-1594(+)
ATGGCAGAACCTTCTAAGGTTATCCATGTACGCAATGTTGGCCATGAAATATCTGAGAATGATTTGCTTCAGCTATTTCAACCCTTTGGAGCTATCACCAAACTTGTGATGTTGCGTGCAAAGAATCAGGCTCTTGTGCAAATGCAAGACGTTGCCTCAGCCATCAGTGTGCTGGAGTTCTGTACAAATGTGCAGCCAAGCATAAGGGGACGGAATGTTTATGTTCAATATTCTTCACATCAAGAATTAACAACAATGGATCAGAATGCTCATGGGCGAGGAGATGAGCCCAATCGAATTCTCTTAGTTACAATTCATCAAATGCTATATCCAATTAACGTGGACGTGCTGCATCAAGTTTTTTCTCCCCATGGATTTGTGGAGAAGATTGTCACATTTCAGAAGTCAGCGGGTTTCCAAGCCCTGATCCAGTATCAATCACGGCAGAGTGCAGTTACTGCAAGGAATTTGCTTCAGGGACGCAATATCTATGATGGTTGTTGCCAGTTGGATATACAATACTCGAATCTTGAAGAATTGCAAGTACACTATAACAATGAACGGACGCGGGATTTCACAAATCCAACATTGCCTTCAGAGCCGAAAGGCAGGGCTTCTCAGCCTGGTTATGTAGATGGTGCTGGTATCTATTCAATTCCAACTTCTGGAGCTCCTGCAGCTGCATTTTCACAGATGGCCAACCATGCAGCTATTGCAGCTGCTTTTGGAGGTGTTTTCCCTCCTGGAATATCTGGAATGAATGAAAGATGTACAATCCTTGTGTCTAACCTTAATCCTGATAGGATAGATGAGGATAAACTTTTTAATTTATTCTCTCTCTATGGGAACATTGTGAGAATCAAACTCCTTCGTAGCAAACCTGATCACGCCTTAGTGGAAATGGGTGATGGCTTCCAATCCGAAATGGCAGTACACTTTCTAAAGGGTGCGATGCTCTTTGGCAAGCGATTGGATGTCAATTTCTCTAGATACCCTAACATCACATCAGGTGCTGACACCCATGAATATCTCAACTCAAATCTTAATCGATTCAACCGCAATGCTGCCAAAAATTACCGCTACTGCTGTTCTCCGACAAAAATGATCCACCTATCCACCCTCCCCCAGGACATCTCCGAGGAAGAAATAGTGAGCCACTTGGAGGAGCATGGCACCATTGTCAATACCAAACTTTTTGAGACCAATTGTAAGAAGCAAGCCCTTGTCTTGTTTGAAAATGAGGAGCAGGCAACTGAAGCCCTGGTGTGCAAGAACGCAAGCAACCTTGGTGGCTCTGTCATACGCATTTCATTCTCCCAGTCACAGGCAATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58479.p1 GENE.S_Transcript_58479~~S_Transcript_58479.p1 ORF type:complete len:445 (+),score=82.31,RRM_5|PF13893.2|2.4e-07,RRM_5|PF13893.2|4.2e-09,RRM_5|PF13893.2|48,RRM_5|PF13893.2|3.5e-10,RRM_5|PF13893.2|3.8e-06,RRM_6|PF14259.2|1.1e-07,RRM_6|PF14259.2|2.5e+03,RRM_6|PF14259.2|0.04,RRM_6|PF14259.2|9e-07,RRM_6|PF14259.2|1.8e-08,RRM_1|PF00076.18|1e-06,RRM_1|PF00076.18|0.0068,RRM_1|PF00076.18|7.1e-06,RRM_1|PF00076.18|3.2e-09,RRM_occluded|PF16842.1|0.053,RRM_occluded|PF16842.1|38,RRM_occluded|PF16842.1|25,RRM_occluded|PF16842.1|0.0051 S_Transcript_58479:260-1594(+)
MAEPSKVIHVRNVGHEISENDLLQLFQPFGAITKLVMLRAKNQALVQMQDVASAISVLEFCTNVQPSIRGRNVYVQYSSHQELTTMDQNAHGRGDEPNRILLVTIHQMLYPINVDVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVTARNLLQGRNIYDGCCQLDIQYSNLEELQVHYNNERTRDFTNPTLPSEPKGRASQPGYVDGAGIYSIPTSGAPAAAFSQMANHAAIAAAFGGVFPPGISGMNERCTILVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRSKPDHALVEMGDGFQSEMAVHFLKGAMLFGKRLDVNFSRYPNITSGADTHEYLNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDISEEEIVSHLEEHGTIVNTKLFETNCKKQALVLFENEEQATEALVCKNASNLGGSVIRISFSQSQAI*

Click here to download the sequence:
Link to NCBI Protein BLAST