Transcript Information: S_Transcript_58489.p1


Annotated TAIR IDAT3G10300.3
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3186436-3188071 | Forward length=335
E-Value4E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1252.50415571939
Replicate 2349.6510889075
Replicate 3343.25620398797
Condition 2: 8 Hour
Replicate 1358.18125576657
Replicate 2360.99214965063
Replicate 3270.71126458326
Condition 3: 24 Hour
Replicate 1378.52814112502
Replicate 2295.35479246296
Replicate 3256.25597115598


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58489.p1 GENE.S_Transcript_58489~~S_Transcript_58489.p1 ORF type:complete len:250 (+),score=44.10,EF-hand_6|PF13405.2|0.0027,EF-hand_6|PF13405.2|1.2e+04,EF-hand_6|PF13405.2|4.9e-06,EF-hand_6|PF13405.2|4.7e+03,EF-hand_1|PF00036.28|0.015,EF-hand_1|PF00036.28|3.6e+03,EF-hand_1|PF00036.28|4.1e-05,EF-hand_1|PF00036.28|1.6e+03,EF-hand_7|PF13499.2|0.00081,EF-hand_5|PF13202.2|0.17,EF-hand_5|PF13202.2|0.003 S_Transcript_58489:136-885(+)
ATGCAAAGCTACCCCCAACGCTCATACGGCTACGAGGGGTCCCAGTACTCAGCTGGGGGAATGGTTCCTGCACCCATGCAGGCACAGCAACAGATGTACCGGGCGTCGAACTCGGCCGGCGGGTACCAACAGCAGATGCAGATGCAAAAGACCTCCTCCTTCTCCTCTTCGTCGTCACAAATGGTGACGGTTTTCGGATCGGAGCCCTTCTGTGACATCCGGCCCTCGGCCTTCCCTCCGGGCACTGACCCTAAGATGATTGAGTGCTACAACAGGATTGATAGGGATGGGAATGGGCTCATTGATGACTGTGAACTTCAGTCTGTGCTTTCCTCTTGCAACCACTCCTTCAGCATTAGGACTGTTCACCTTCTCATGTATCAGTTCACTCACTCCAACAAGAGGTTCATTGGTCCAAGGGAATTCGTCCCACTGCTCAAATGCCTCCAAAGCTGGAGGTCAATGTTCCAAAGGTTTGACAGGGACAGGAATGGGAGTGTTGATTCAATGGAGTTGGGTCAAGCTCTTTCAAGCTTAGGCTACTGCGTTTCTCCTGTGATTGTCAACATGCTTGTTGCTAAGTTTAACAAAACTGGAAGGTGTTCTCTTAAATATGATGAATTCATTGAGTGCTGCCTCACTGTTAAGGGGTTGACTGAGACATTCAAGGCAAGAGCTGATGCTTGTGGCAAAGCAAGTTTCTGTTATGAGGAGTTCCTGCTCAATGTTTTGCCCTTCATCGTCGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58489.p1 GENE.S_Transcript_58489~~S_Transcript_58489.p1 ORF type:complete len:250 (+),score=44.10,EF-hand_6|PF13405.2|0.0027,EF-hand_6|PF13405.2|1.2e+04,EF-hand_6|PF13405.2|4.9e-06,EF-hand_6|PF13405.2|4.7e+03,EF-hand_1|PF00036.28|0.015,EF-hand_1|PF00036.28|3.6e+03,EF-hand_1|PF00036.28|4.1e-05,EF-hand_1|PF00036.28|1.6e+03,EF-hand_7|PF13499.2|0.00081,EF-hand_5|PF13202.2|0.17,EF-hand_5|PF13202.2|0.003 S_Transcript_58489:136-885(+)
MQSYPQRSYGYEGSQYSAGGMVPAPMQAQQQMYRASNSAGGYQQQMQMQKTSSFSSSSSQMVTVFGSEPFCDIRPSAFPPGTDPKMIECYNRIDRDGNGLIDDCELQSVLSSCNHSFSIRTVHLLMYQFTHSNKRFIGPREFVPLLKCLQSWRSMFQRFDRDRNGSVDSMELGQALSSLGYCVSPVIVNMLVAKFNKTGRCSLKYDEFIECCLTVKGLTETFKARADACGKASFCYEEFLLNVLPFIVA*

Click here to download the sequence:
Link to NCBI Protein BLAST