Transcript Information: S_Transcript_58493.p1


Annotated TAIR IDAT1G30610.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)EMB88, EMB2279
Annotation TypeHomolog
Chromosome Positionchr1:10846676-10850517 | Forward length=1006
E-Value1E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11801774383672
Replicate 20.29351826462326
Replicate 30.20446492332151
Condition 2: 8 Hour
Replicate 10.094569358390834
Replicate 20.54565484487138
Replicate 30.51989872207272
Condition 3: 24 Hour
Replicate 10
Replicate 20.10050470765564
Replicate 30.22369884173052


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58493.p1 GENE.S_Transcript_58493~~S_Transcript_58493.p1 ORF type:3prime_partial len:451 (+),score=99.44,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|0.014,PPR|PF01535.16|62 S_Transcript_58493:267-1616(+)
ATGGGTTGCGTTTCAATGTCAATTGGGTTCACTCTTCAGAGACCTGCTTTTGGACTTGGTTTGAACCTGAGAAAAAAGAAGCAGGGTGCTTTGGTTTCTGTGTCGAGAAGACATAGTAAAGTAATAACCAACTCAGTGTCAACTAGACAAGTGGACAGCAATATTCTTTTAAAGGAGGACACTAAATTCAAGTCGTCATTTGATGAGTATTTGAAGGTGATGGAGTCTATTAGAGCTGAAAGGGACAAGAAGAAAGCTCAAAAAGGCAGTCATGGGCATAAAAATCAAGTTGTAGATGTTGCATTGAGTAAAGACGATCCACGGGCTCAACAACATGGGAAAAACACTAATATTAAATGGTTGAAAGGGTCGGGCTCCAAGGCAAAAGATGACACACGCAGAGTATTGGGTAAAGATGCTCAATGGGCTCAGCAGTTTGGTAAAAGCACTAGTATTAAATCGTTTAAAGCGTCAGGCTCCAAGGAAAATGATGAACCACGCAGAGTATTGAGTAAAGATGCTCCATGGGCTCAACAACATGGGAAAATCGCTAATATTAAGAGGTTTAAAGGACCAGGCTTCAAGGAAAAAGATGCGCCACGTGGAGTTGCAGGGAATGGCAGGTTCGGTGATAGTATTCAACCAAGAAACTCTATAAGAATTGACAGCCAGGCAAAGGTTGTCAAATTACAAGACAGTTCAAGTACAACATTACGTGTAGACTCTACTCCTGTTTCAATCCCTGAGCTTGTTGGTAACAAAAGACTGCCCAAGAGTGAGATAAGGACTGATGATGAGTTGGAGATGAAAAGTTTTCTCTTTGAAGAATCTGAACTACTTGGTGATGTTCAAGATGGTCCACGAGTTTCACGGATGGAAATGGAGGAAAGAATTCAGAAGCTTGCAAAAAGTTTAGATGATGCTGATATGGATATGCCAGAATGGATGTTTTCTAAGATAATGCGGAGTGCCCAGATCAGATTTTCTGATCATTCCATGCTGAGGGTTATTCAGATATTGGGTAAGCTTGGAAATTGGAGACGTGTACTGCAAGTAGTTGAGTGGCTTCAAATGCATGAGCGCTACAAATCCCTTAAAATCAGATATGTCTACACAGCTGCACTTGATGTACTTGGGAAGGCAAGACGTCCGGTGGAAGCATTAAATTTATTTTGTGCAATGCTGCGACACATGGACTTGTATCCTGACATTGTAGCTTATCATTCAATTGCTGTTACTCTTGGACAAGCTGGTCATATGAAGGAACTTTTTGATGTAATGGATAGCATGAGATGTATGCCTAAGCACTTTAAGGTTGAAGCTCTTGAGAATTGGGATCCACGGCTTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58493.p1 GENE.S_Transcript_58493~~S_Transcript_58493.p1 ORF type:3prime_partial len:451 (+),score=99.44,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|0.014,PPR|PF01535.16|62 S_Transcript_58493:267-1616(+)
MGCVSMSIGFTLQRPAFGLGLNLRKKKQGALVSVSRRHSKVITNSVSTRQVDSNILLKEDTKFKSSFDEYLKVMESIRAERDKKKAQKGSHGHKNQVVDVALSKDDPRAQQHGKNTNIKWLKGSGSKAKDDTRRVLGKDAQWAQQFGKSTSIKSFKASGSKENDEPRRVLSKDAPWAQQHGKIANIKRFKGPGFKEKDAPRGVAGNGRFGDSIQPRNSIRIDSQAKVVKLQDSSSTTLRVDSTPVSIPELVGNKRLPKSEIRTDDELEMKSFLFEESELLGDVQDGPRVSRMEMEERIQKLAKSLDDADMDMPEWMFSKIMRSAQIRFSDHSMLRVIQILGKLGNWRRVLQVVEWLQMHERYKSLKIRYVYTAALDVLGKARRPVEALNLFCAMLRHMDLYPDIVAYHSIAVTLGQAGHMKELFDVMDSMRCMPKHFKVEALENWDPRLE

Click here to download the sequence:
Link to NCBI Protein BLAST