Transcript Information: S_Transcript_58540.p1


Annotated TAIR IDAT5G58130.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)ROS3
Annotation TypeHomolog
Chromosome Positionchr5:23521190-23523766 | Reverse length=748
E-Value4E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2086980616952
Replicate 21.6209396409603
Replicate 31.8317275293916
Condition 2: 8 Hour
Replicate 11.943947144555
Replicate 21.8567112476508
Replicate 31.7980714986515
Condition 3: 24 Hour
Replicate 11.5752092857163
Replicate 21.4492505361746
Replicate 32.1962052271121


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58540.p1 GENE.S_Transcript_58540~~S_Transcript_58540.p1 ORF type:5prime_partial len:735 (+),score=186.54,RRM_6|PF14259.2|8.8e-08,RRM_1|PF00076.18|8.7e-07,RRM_5|PF13893.2|1.5e-05 S_Transcript_58540:2-2206(+)
GGGACCTTTGTGTATGTATGCACAGACACAGTAATAGAACCCGCAGTGTGCGCCGCTACGACAGCTGAACAAAACCCCCCGAGGGCTTCTAGTTCTAGTTCTAGTTCTAGTTCTAGGCACCAAACAACCAGCCAAGTGAACAACCAACCGGGCAAGATGACAACGTCAACAACAGGGACAACAACAAGGATATACATAGGTGGATTGGGAGAAAGAGTAACAAAAGATGATCTTAGAAACACATTTGCTAATCTGGGCTCACTTCAATCTGTTGATATCATCAGAACCAAAGGCCGTAGCTTTGCTTACATCAACTTTCTTCCTTCTTCTGATAATTCCCTCGCTAAACTCTTCAGCACGTATAATGGGTGTTTGTGGAAAGGAGGGAGGCTGAAACTTGAGAAGGCTAAAGAACATTATACTGACCGGCTGAAACGGGAGTGGGCAGAAGATGCTGAACTCACAACTGGAGCTGATATCAATCATGTTGATGATGAGGATATGGCTGCTTCCGCAGAGCCAAAGAGCAGCATTGATATTGAAAAGATGCAGATTCGGATTTTCTTCCCTAAACTGAGAAAGGTGAAAGCACTGCCTCTTCGTGGGACTGGCAAACACAAATATAGCTTCCAGCGAGTTGCAGCTCCTTCTCTTCCAGCTCATTTCTGTGATTGCCCAGAGCACTCTAACACTGTTGATGTTCCAAAACAATCAAAAGATCAAAAGTCGATTATGACCAGACGTTTTGAAAGGGAAACTTGTTCAGGATCCAAAAGCTTCAAACCCCCAAGTGAAACAGAAGGACAACATTCAATAATACAAGATGGTGGTATGAATGATGAAGAAATTAATGTAATGAAATCAGTGATGAAAAAGCTCTTCGATAGGGGATTTTCTTCAAGAGCGAAAAGGAAGGATGTCCCAGATTCTTCACAGCAAAATGTCCCTGCCTCTGATTTGCCAATTGATACAAATGAATTAGATGATGAAACAGATGATGATGATGATGACATAAAGATCAATATGGTGGCTGGGCAAAATAATGTTCAAGATTCTTCACCTGAAGATGTTCCTACTTCTGATTTCCCAGTTGACATGGATGAATTAGATGATCAAACAGATGATGATGACTTAACAATCAATATGGTGGCTGGGCGAAAAAAAGGGTCCTCTCTAGAGATCGAGGAGCTGGAAACAAGCTTGCTCAGCAAGATGGCAAAGTCGGTTGAGAAGTTGAGTTATGGTGATTTGGCTACCGAAGGCGAGCTAGGGAACTGTAAACCAAAAGATAAACCTTCTAACAAGAAACGAAAATCTCTTTCTAGTGAAAGCAATGAAAAGGATCAGGCATCTAGTGTATCTAAGAAGAAGGTTCGCACACAAACTCAATCAAATGTGTCAGAAGAGTTTATGAAAAGTTTGAACACTGTAACGGTATCTGGATCCAATAAATCAAGTACCCAAAATGGTGTGTGGTCTCAGAAGTCTGCCTGGAGAGAACTGGTTGGTGATGGTGCAAGCAGTTCATTTAGCCTTTCTCATATTGCACCTCTTGACGAGTCCAACAGTGACAGGCGGCCTAAACTGGTTAATGAAACATCATCTGATACCAAGGACCATGAAGATTTGAATAATGTTGTCCTTGTAAACCTGGATGGTCAACCATCTGAACCGAGCAAGAAAGAGGAGGGGGTTCTTGCAGCTCAGCCCGCTGGACCAAGTACAGGTGCTGATAAATCAACCAAAGGCAATTCATGGCTGCAGAAATCCTCATGGACACAGCTCATCGGTGGTGGAAACAGCAGTTCCTTTAGCATATCTCAAATCGTACCTGCAGATATGGTTCAGAAGCAAGAACTGCAGAAACCAAATGCTAATAATTCTACATCAGGTGTTTCTGGTGGCACTGCAGTAAAGGGGCAGAGAACAAATGAAACAACTATTGGTGGTTCTCGAGGTTTCGTGTTTGGCTTTGGTCCCAATAAGACAAGTGATGCCAAGATGAGTGCTCCGAAAGGCATTGAGGTGAGTAAAGCTCTTAGTGGATCTGATTCAAAACAAAATCAGTCATCACCCAAATCGCGTCCTGGAGTTGCAGTTGGTGAAAGCAGCCCTTTTATGAGGAATGCTGAATCACTGAAAGATTGGATGACAGCAAAAACAGCTTTAAGTAATGCCCTCAAGAAAAGAAACAACAATAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58540.p1 GENE.S_Transcript_58540~~S_Transcript_58540.p1 ORF type:5prime_partial len:735 (+),score=186.54,RRM_6|PF14259.2|8.8e-08,RRM_1|PF00076.18|8.7e-07,RRM_5|PF13893.2|1.5e-05 S_Transcript_58540:2-2206(+)
GTFVYVCTDTVIEPAVCAATTAEQNPPRASSSSSSSSSRHQTTSQVNNQPGKMTTSTTGTTTRIYIGGLGERVTKDDLRNTFANLGSLQSVDIIRTKGRSFAYINFLPSSDNSLAKLFSTYNGCLWKGGRLKLEKAKEHYTDRLKREWAEDAELTTGADINHVDDEDMAASAEPKSSIDIEKMQIRIFFPKLRKVKALPLRGTGKHKYSFQRVAAPSLPAHFCDCPEHSNTVDVPKQSKDQKSIMTRRFERETCSGSKSFKPPSETEGQHSIIQDGGMNDEEINVMKSVMKKLFDRGFSSRAKRKDVPDSSQQNVPASDLPIDTNELDDETDDDDDDIKINMVAGQNNVQDSSPEDVPTSDFPVDMDELDDQTDDDDLTINMVAGRKKGSSLEIEELETSLLSKMAKSVEKLSYGDLATEGELGNCKPKDKPSNKKRKSLSSESNEKDQASSVSKKKVRTQTQSNVSEEFMKSLNTVTVSGSNKSSTQNGVWSQKSAWRELVGDGASSSFSLSHIAPLDESNSDRRPKLVNETSSDTKDHEDLNNVVLVNLDGQPSEPSKKEEGVLAAQPAGPSTGADKSTKGNSWLQKSSWTQLIGGGNSSSFSISQIVPADMVQKQELQKPNANNSTSGVSGGTAVKGQRTNETTIGGSRGFVFGFGPNKTSDAKMSAPKGIEVSKALSGSDSKQNQSSPKSRPGVAVGESSPFMRNAESLKDWMTAKTALSNALKKRNNNK*

Click here to download the sequence:
Link to NCBI Protein BLAST