Transcript Information: S_Transcript_58643.p1


Annotated TAIR IDAT1G18870.1
Annotated Gene Nameisochorismate synthase 2
Annotated Gene Symbol(s)ICS2, ATICS2
Annotation TypeHomolog
Chromosome Positionchr1:6515486-6519176 | Forward length=562
E-Value1E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.91768969776484
Replicate 21.4128880012202
Replicate 31.0902110000158
Condition 2: 8 Hour
Replicate 10.52525591914121
Replicate 20.11020615093461
Replicate 30
Condition 3: 24 Hour
Replicate 10.75327184450325
Replicate 22.2328878400342
Replicate 31.4909582899576


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_58643.p1 GENE.S_Transcript_58643~~S_Transcript_58643.p1 ORF type:complete len:203 (+),score=38.99,Chorismate_bind|PF00425.14|6.2e-12 S_Transcript_58643:2409-3017(+)
ATGGTTCCTCAGGTTGAGTTTGATGAGCTTGAAGGTAAATCCTTGCTGGCTGCTAATGTTGCATGGGACGATTCCCTTTCATGCTCTTGGGAAATGGCAATTGAATCCTTTCAAGCTAAATTAGACCAGGTCACATATGTTATTAAGAAGTTGGAGAAAGATGCCCATAAAACATCCATTACTGGCAATATTCTCCATGTCCCCAGTGAGACAGATTGGGATAGTGCTGTTAAGAAAGCAGTGCATATGATCAGAAGAAGCCGCTCAACACTAACTAAGGTTGTACTTGCACGTAGCAGCAGAATATTTACTGCCTCTGATATAGATCCGGTTGCATGGTTAGCTTGTTTACAGGTGGAGGGGGATAATGCTTACCAGTTCTTGCTTCAGCCACCTAATGCGCCAGCTTTCATCGGAAACACTCCAGAGCAGCTCTTTTACCGGAAGAACTTGAGTATTTGGAGTGAAGCTTTGGCTGGAACCCGAGCAAGATGTGGATCAAGGACCGTAGATCACACAATAGGACTTGATCTTCTCTCCAGGTTCTTCATTGAGCTTTGTATATCCCCAAAGATGACCTGGAGTTTACAATTGTTCGAGAGTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_58643.p1 GENE.S_Transcript_58643~~S_Transcript_58643.p1 ORF type:complete len:203 (+),score=38.99,Chorismate_bind|PF00425.14|6.2e-12 S_Transcript_58643:2409-3017(+)
MVPQVEFDELEGKSLLAANVAWDDSLSCSWEMAIESFQAKLDQVTYVIKKLEKDAHKTSITGNILHVPSETDWDSAVKKAVHMIRRSRSTLTKVVLARSSRIFTASDIDPVAWLACLQVEGDNAYQFLLQPPNAPAFIGNTPEQLFYRKNLSIWSEALAGTRARCGSRTVDHTIGLDLLSRFFIELCISPKMTWSLQLFESA*

Click here to download the sequence:
Link to NCBI Protein BLAST